Protein–RNA interactions for Protein: F6RGA8

C530025M09Rik, RIKEN cDNA C530025M09 gene, mousemouse

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C530025M09RikF6RGA8 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
C530025M09RikF6RGA8 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
C530025M09RikF6RGA8 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
C530025M09RikF6RGA8 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
C530025M09RikF6RGA8 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
C530025M09RikF6RGA8 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
C530025M09RikF6RGA8 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
C530025M09RikF6RGA8 Gm17082-201ENSMUST00000166043 1091 ntBASIC16.66■□□□□ 0.26
C530025M09RikF6RGA8 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
C530025M09RikF6RGA8 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
C530025M09RikF6RGA8 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
C530025M09RikF6RGA8 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C530025M09RikF6RGA8 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
C530025M09RikF6RGA8 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
C530025M09RikF6RGA8 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
C530025M09RikF6RGA8 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
C530025M09RikF6RGA8 Gm27322-201ENSMUST00000184007 104 ntBASIC16.63■□□□□ 0.25
C530025M09RikF6RGA8 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
C530025M09RikF6RGA8 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
C530025M09RikF6RGA8 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
C530025M09RikF6RGA8 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
C530025M09RikF6RGA8 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
C530025M09RikF6RGA8 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC16.62■□□□□ 0.25
C530025M09RikF6RGA8 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC16.62■□□□□ 0.25
C530025M09RikF6RGA8 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
C530025M09RikF6RGA8 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
C530025M09RikF6RGA8 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
C530025M09RikF6RGA8 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
C530025M09RikF6RGA8 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
C530025M09RikF6RGA8 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
C530025M09RikF6RGA8 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
C530025M09RikF6RGA8 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC16.58■□□□□ 0.24
C530025M09RikF6RGA8 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
C530025M09RikF6RGA8 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
C530025M09RikF6RGA8 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC16.56■□□□□ 0.24
C530025M09RikF6RGA8 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
C530025M09RikF6RGA8 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
C530025M09RikF6RGA8 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
C530025M09RikF6RGA8 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
C530025M09RikF6RGA8 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
C530025M09RikF6RGA8 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
C530025M09RikF6RGA8 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC16.55■□□□□ 0.24
C530025M09RikF6RGA8 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC16.55■□□□□ 0.24
C530025M09RikF6RGA8 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
C530025M09RikF6RGA8 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
C530025M09RikF6RGA8 Gm30346-201ENSMUST00000218641 1699 ntBASIC16.53■□□□□ 0.24
C530025M09RikF6RGA8 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
C530025M09RikF6RGA8 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
C530025M09RikF6RGA8 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
C530025M09RikF6RGA8 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC16.52■□□□□ 0.23
C530025M09RikF6RGA8 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
C530025M09RikF6RGA8 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC16.52■□□□□ 0.23
C530025M09RikF6RGA8 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
C530025M09RikF6RGA8 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
C530025M09RikF6RGA8 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
C530025M09RikF6RGA8 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
C530025M09RikF6RGA8 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
C530025M09RikF6RGA8 Fezf2-202ENSMUST00000224023 1917 ntBASIC16.48■□□□□ 0.23
C530025M09RikF6RGA8 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
C530025M09RikF6RGA8 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
C530025M09RikF6RGA8 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
C530025M09RikF6RGA8 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
C530025M09RikF6RGA8 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
C530025M09RikF6RGA8 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
C530025M09RikF6RGA8 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
C530025M09RikF6RGA8 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
C530025M09RikF6RGA8 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
C530025M09RikF6RGA8 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
C530025M09RikF6RGA8 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
C530025M09RikF6RGA8 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC16.45■□□□□ 0.22
C530025M09RikF6RGA8 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
C530025M09RikF6RGA8 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
C530025M09RikF6RGA8 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC16.44■□□□□ 0.22
C530025M09RikF6RGA8 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC16.44■□□□□ 0.22
C530025M09RikF6RGA8 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
C530025M09RikF6RGA8 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
C530025M09RikF6RGA8 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
C530025M09RikF6RGA8 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
C530025M09RikF6RGA8 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
C530025M09RikF6RGA8 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
C530025M09RikF6RGA8 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
C530025M09RikF6RGA8 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
C530025M09RikF6RGA8 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC16.42■□□□□ 0.22
C530025M09RikF6RGA8 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
C530025M09RikF6RGA8 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
C530025M09RikF6RGA8 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
C530025M09RikF6RGA8 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
C530025M09RikF6RGA8 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
C530025M09RikF6RGA8 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C530025M09RikF6RGA8 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
C530025M09RikF6RGA8 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
C530025M09RikF6RGA8 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
C530025M09RikF6RGA8 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
C530025M09RikF6RGA8 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
C530025M09RikF6RGA8 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
C530025M09RikF6RGA8 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC16.35■□□□□ 0.21
C530025M09RikF6RGA8 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
C530025M09RikF6RGA8 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
C530025M09RikF6RGA8 Peli2-204ENSMUST00000226513 1320 ntBASIC16.35■□□□□ 0.21
C530025M09RikF6RGA8 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms