Protein–RNA interactions for Protein: D3YV89

Mmp27, Matrix metalloproteinase, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp27D3YV89 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Mmp27D3YV89 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mmp27D3YV89 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Mmp27D3YV89 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Mmp27D3YV89 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Mmp27D3YV89 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Mmp27D3YV89 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Mmp27D3YV89 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Mmp27D3YV89 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20.95■□□□□ 0.94
Mmp27D3YV89 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Mmp27D3YV89 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Mmp27D3YV89 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Mmp27D3YV89 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mmp27D3YV89 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mmp27D3YV89 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Mmp27D3YV89 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Mmp27D3YV89 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Mmp27D3YV89 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.9■□□□□ 0.94
Mmp27D3YV89 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Mmp27D3YV89 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Mmp27D3YV89 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Mmp27D3YV89 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Mmp27D3YV89 Gm24804-201ENSMUST00000174982 85 ntBASIC20.88■□□□□ 0.93
Mmp27D3YV89 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Mmp27D3YV89 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Mmp27D3YV89 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Mmp27D3YV89 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Mmp27D3YV89 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Mmp27D3YV89 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.86■□□□□ 0.93
Mmp27D3YV89 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Mmp27D3YV89 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Mmp27D3YV89 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Mmp27D3YV89 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.83■□□□□ 0.93
Mmp27D3YV89 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Mmp27D3YV89 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Mmp27D3YV89 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Mmp27D3YV89 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Mmp27D3YV89 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Mmp27D3YV89 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Mmp27D3YV89 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Mmp27D3YV89 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.8■□□□□ 0.92
Mmp27D3YV89 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.79■□□□□ 0.92
Mmp27D3YV89 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Mmp27D3YV89 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Mmp27D3YV89 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mmp27D3YV89 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mmp27D3YV89 Amer2-203ENSMUST00000225247 2662 ntBASIC20.78■□□□□ 0.92
Mmp27D3YV89 Mipep-204ENSMUST00000225043 1548 ntBASIC20.78■□□□□ 0.92
Mmp27D3YV89 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Mmp27D3YV89 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Mmp27D3YV89 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mmp27D3YV89 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.75■□□□□ 0.91
Mmp27D3YV89 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mmp27D3YV89 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mmp27D3YV89 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mmp27D3YV89 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mmp27D3YV89 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mmp27D3YV89 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Mmp27D3YV89 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.71■□□□□ 0.91
Mmp27D3YV89 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Mmp27D3YV89 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Mmp27D3YV89 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mmp27D3YV89 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Mmp27D3YV89 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Mmp27D3YV89 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mmp27D3YV89 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Mmp27D3YV89 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.68■□□□□ 0.9
Mmp27D3YV89 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Mmp27D3YV89 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mmp27D3YV89 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mmp27D3YV89 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mmp27D3YV89 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mmp27D3YV89 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Mmp27D3YV89 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mmp27D3YV89 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Mmp27D3YV89 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mmp27D3YV89 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Mmp27D3YV89 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mmp27D3YV89 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mmp27D3YV89 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Mmp27D3YV89 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Mmp27D3YV89 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mmp27D3YV89 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Mmp27D3YV89 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Mmp27D3YV89 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mmp27D3YV89 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Mmp27D3YV89 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Mmp27D3YV89 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Mmp27D3YV89 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Mmp27D3YV89 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Mmp27D3YV89 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.57■□□□□ 0.88
Mmp27D3YV89 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Mmp27D3YV89 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Mmp27D3YV89 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.54■□□□□ 0.88
Mmp27D3YV89 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp27D3YV89 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp27D3YV89 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp27D3YV89 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp27D3YV89 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp27D3YV89 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms