Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Trav12-1A0N8R1 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trav12-1A0N8R1 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trav12-1A0N8R1 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trav12-1A0N8R1 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Trav12-1A0N8R1 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC21.13■□□□□ 0.97
Trav12-1A0N8R1 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Trav12-1A0N8R1 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trav12-1A0N8R1 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC21.12■□□□□ 0.97
Trav12-1A0N8R1 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.12■□□□□ 0.97
Trav12-1A0N8R1 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
Trav12-1A0N8R1 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Trav12-1A0N8R1 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Trav12-1A0N8R1 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
Trav12-1A0N8R1 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trav12-1A0N8R1 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trav12-1A0N8R1 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Trav12-1A0N8R1 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trav12-1A0N8R1 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trav12-1A0N8R1 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trav12-1A0N8R1 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Trav12-1A0N8R1 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Trav12-1A0N8R1 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trav12-1A0N8R1 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Trav12-1A0N8R1 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trav12-1A0N8R1 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Trav12-1A0N8R1 Amer2-203ENSMUST00000225247 2662 ntBASIC21.06■□□□□ 0.96
Trav12-1A0N8R1 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trav12-1A0N8R1 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trav12-1A0N8R1 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trav12-1A0N8R1 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.04■□□□□ 0.96
Trav12-1A0N8R1 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.03■□□□□ 0.96
Trav12-1A0N8R1 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trav12-1A0N8R1 Gm30346-201ENSMUST00000218641 1699 ntBASIC21.02■□□□□ 0.95
Trav12-1A0N8R1 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trav12-1A0N8R1 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trav12-1A0N8R1 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trav12-1A0N8R1 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Trav12-1A0N8R1 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21■□□□□ 0.95
Trav12-1A0N8R1 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC20.99■□□□□ 0.95
Trav12-1A0N8R1 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trav12-1A0N8R1 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Trav12-1A0N8R1 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trav12-1A0N8R1 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trav12-1A0N8R1 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
Trav12-1A0N8R1 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Trav12-1A0N8R1 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trav12-1A0N8R1 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trav12-1A0N8R1 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trav12-1A0N8R1 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trav12-1A0N8R1 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.96■□□□□ 0.95
Trav12-1A0N8R1 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trav12-1A0N8R1 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trav12-1A0N8R1 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Trav12-1A0N8R1 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.93■□□□□ 0.94
Trav12-1A0N8R1 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trav12-1A0N8R1 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trav12-1A0N8R1 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trav12-1A0N8R1 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.9■□□□□ 0.94
Trav12-1A0N8R1 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Trav12-1A0N8R1 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trav12-1A0N8R1 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trav12-1A0N8R1 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.88■□□□□ 0.93
Trav12-1A0N8R1 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.88■□□□□ 0.93
Trav12-1A0N8R1 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trav12-1A0N8R1 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trav12-1A0N8R1 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trav12-1A0N8R1 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trav12-1A0N8R1 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trav12-1A0N8R1 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trav12-1A0N8R1 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trav12-1A0N8R1 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.87■□□□□ 0.93
Trav12-1A0N8R1 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Trav12-1A0N8R1 Peli2-204ENSMUST00000226513 1320 ntBASIC20.83■□□□□ 0.93
Trav12-1A0N8R1 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trav12-1A0N8R1 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trav12-1A0N8R1 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.82■□□□□ 0.92
Trav12-1A0N8R1 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trav12-1A0N8R1 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Trav12-1A0N8R1 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trav12-1A0N8R1 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trav12-1A0N8R1 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trav12-1A0N8R1 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trav12-1A0N8R1 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trav12-1A0N8R1 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Trav12-1A0N8R1 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trav12-1A0N8R1 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trav12-1A0N8R1 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Trav12-1A0N8R1 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.75■□□□□ 0.91
Trav12-1A0N8R1 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trav12-1A0N8R1 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trav12-1A0N8R1 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trav12-1A0N8R1 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Trav12-1A0N8R1 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Trav12-1A0N8R1 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Trav12-1A0N8R1 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trav12-1A0N8R1 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trav12-1A0N8R1 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trav12-1A0N8R1 Gm26115-201ENSMUST00000175605 87 ntBASIC20.73■□□□□ 0.91
Trav12-1A0N8R1 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms