Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Gm9905-201ENSMUST00000065740 1845 ntBASIC16.49■□□□□ 0.23
Igkv1-88A0A140T8N1 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Igkv1-88A0A140T8N1 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv1-88A0A140T8N1 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Igkv1-88A0A140T8N1 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv1-88A0A140T8N1 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Igkv1-88A0A140T8N1 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Igkv1-88A0A140T8N1 Gm6206-201ENSMUST00000133472 2199 ntBASIC16.48■□□□□ 0.23
Igkv1-88A0A140T8N1 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Igkv1-88A0A140T8N1 Zxda-201ENSMUST00000117281 2621 ntBASIC16.46■□□□□ 0.23
Igkv1-88A0A140T8N1 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Igkv1-88A0A140T8N1 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
Igkv1-88A0A140T8N1 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igkv1-88A0A140T8N1 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Igkv1-88A0A140T8N1 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Igkv1-88A0A140T8N1 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC16.43■□□□□ 0.22
Igkv1-88A0A140T8N1 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Igkv1-88A0A140T8N1 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Igkv1-88A0A140T8N1 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv1-88A0A140T8N1 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv1-88A0A140T8N1 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv1-88A0A140T8N1 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC16.41■□□□□ 0.22
Igkv1-88A0A140T8N1 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Igkv1-88A0A140T8N1 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Igkv1-88A0A140T8N1 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Igkv1-88A0A140T8N1 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Igkv1-88A0A140T8N1 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Igkv1-88A0A140T8N1 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Igkv1-88A0A140T8N1 Gm43445-201ENSMUST00000198564 2091 ntBASIC16.36■□□□□ 0.21
Igkv1-88A0A140T8N1 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Igkv1-88A0A140T8N1 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Igkv1-88A0A140T8N1 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Igkv1-88A0A140T8N1 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Igkv1-88A0A140T8N1 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Igkv1-88A0A140T8N1 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Igkv1-88A0A140T8N1 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Igkv1-88A0A140T8N1 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC16.34■□□□□ 0.21
Igkv1-88A0A140T8N1 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Igkv1-88A0A140T8N1 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
Igkv1-88A0A140T8N1 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Igkv1-88A0A140T8N1 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Igkv1-88A0A140T8N1 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Igkv1-88A0A140T8N1 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Igkv1-88A0A140T8N1 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Igkv1-88A0A140T8N1 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Igkv1-88A0A140T8N1 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Igkv1-88A0A140T8N1 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Igkv1-88A0A140T8N1 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
Igkv1-88A0A140T8N1 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Igkv1-88A0A140T8N1 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Igkv1-88A0A140T8N1 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Igkv1-88A0A140T8N1 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Igkv1-88A0A140T8N1 Gm27322-201ENSMUST00000184007 104 ntBASIC16.28■□□□□ 0.2
Igkv1-88A0A140T8N1 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Igkv1-88A0A140T8N1 AC166822.3-201ENSMUST00000227394 661 ntBASIC16.28■□□□□ 0.2
Igkv1-88A0A140T8N1 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Igkv1-88A0A140T8N1 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Igkv1-88A0A140T8N1 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Igkv1-88A0A140T8N1 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Igkv1-88A0A140T8N1 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Igkv1-88A0A140T8N1 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC16.27■□□□□ 0.2
Igkv1-88A0A140T8N1 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Igkv1-88A0A140T8N1 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Igkv1-88A0A140T8N1 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Igkv1-88A0A140T8N1 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Igkv1-88A0A140T8N1 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Igkv1-88A0A140T8N1 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Igkv1-88A0A140T8N1 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Igkv1-88A0A140T8N1 Amer2-203ENSMUST00000225247 2662 ntBASIC16.24■□□□□ 0.19
Igkv1-88A0A140T8N1 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Igkv1-88A0A140T8N1 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Igkv1-88A0A140T8N1 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Igkv1-88A0A140T8N1 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Igkv1-88A0A140T8N1 Gm17082-201ENSMUST00000166043 1091 ntBASIC16.22■□□□□ 0.19
Igkv1-88A0A140T8N1 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Igkv1-88A0A140T8N1 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Igkv1-88A0A140T8N1 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Igkv1-88A0A140T8N1 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Igkv1-88A0A140T8N1 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Igkv1-88A0A140T8N1 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC16.21■□□□□ 0.19
Igkv1-88A0A140T8N1 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Igkv1-88A0A140T8N1 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Igkv1-88A0A140T8N1 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Igkv1-88A0A140T8N1 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Igkv1-88A0A140T8N1 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Igkv1-88A0A140T8N1 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Igkv1-88A0A140T8N1 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
Igkv1-88A0A140T8N1 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC16.18■□□□□ 0.18
Igkv1-88A0A140T8N1 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Igkv1-88A0A140T8N1 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Igkv1-88A0A140T8N1 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Igkv1-88A0A140T8N1 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Igkv1-88A0A140T8N1 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Igkv1-88A0A140T8N1 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Igkv1-88A0A140T8N1 Gm6345-201ENSMUST00000180378 1691 ntBASIC16.15■□□□□ 0.18
Igkv1-88A0A140T8N1 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Igkv1-88A0A140T8N1 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Igkv1-88A0A140T8N1 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Igkv1-88A0A140T8N1 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Igkv1-88A0A140T8N1 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms