Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Cfap99A0A140LIX9 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Cfap99A0A140LIX9 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC30.38■■■□□ 2.45
Cfap99A0A140LIX9 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Cfap99A0A140LIX9 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Cfap99A0A140LIX9 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Cfap99A0A140LIX9 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC30.35■■■□□ 2.45
Cfap99A0A140LIX9 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC30.33■■■□□ 2.45
Cfap99A0A140LIX9 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Cfap99A0A140LIX9 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Cfap99A0A140LIX9 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Cfap99A0A140LIX9 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC30.27■■■□□ 2.44
Cfap99A0A140LIX9 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
Cfap99A0A140LIX9 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC30.27■■■□□ 2.44
Cfap99A0A140LIX9 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC30.25■■■□□ 2.43
Cfap99A0A140LIX9 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Cfap99A0A140LIX9 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC30.21■■■□□ 2.43
Cfap99A0A140LIX9 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Cfap99A0A140LIX9 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Cfap99A0A140LIX9 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
Cfap99A0A140LIX9 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
Cfap99A0A140LIX9 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Cfap99A0A140LIX9 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
Cfap99A0A140LIX9 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Cfap99A0A140LIX9 Gm24970-201ENSMUST00000175582 82 ntBASIC30.16■■■□□ 2.42
Cfap99A0A140LIX9 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC30.15■■■□□ 2.42
Cfap99A0A140LIX9 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Cfap99A0A140LIX9 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC30.14■■■□□ 2.42
Cfap99A0A140LIX9 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC30.12■■■□□ 2.41
Cfap99A0A140LIX9 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC30.12■■■□□ 2.41
Cfap99A0A140LIX9 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC30.12■■■□□ 2.41
Cfap99A0A140LIX9 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
Cfap99A0A140LIX9 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC30.1■■■□□ 2.41
Cfap99A0A140LIX9 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC30.09■■■□□ 2.41
Cfap99A0A140LIX9 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Cfap99A0A140LIX9 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC30.08■■■□□ 2.41
Cfap99A0A140LIX9 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC30.06■■■□□ 2.4
Cfap99A0A140LIX9 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
Cfap99A0A140LIX9 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Cfap99A0A140LIX9 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Cfap99A0A140LIX9 AC153504.1-201ENSMUST00000218379 2290 ntBASIC30■■■□□ 2.39
Cfap99A0A140LIX9 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC30■■■□□ 2.39
Cfap99A0A140LIX9 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Cfap99A0A140LIX9 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Cfap99A0A140LIX9 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
Cfap99A0A140LIX9 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Cfap99A0A140LIX9 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC29.98■■■□□ 2.39
Cfap99A0A140LIX9 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Cfap99A0A140LIX9 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC29.96■■■□□ 2.39
Cfap99A0A140LIX9 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC29.95■■■□□ 2.39
Cfap99A0A140LIX9 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
Cfap99A0A140LIX9 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
Cfap99A0A140LIX9 Gm5987-201ENSMUST00000196433 1151 ntBASIC29.94■■■□□ 2.38
Cfap99A0A140LIX9 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
Cfap99A0A140LIX9 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Cfap99A0A140LIX9 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Cfap99A0A140LIX9 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
Cfap99A0A140LIX9 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Cfap99A0A140LIX9 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC29.91■■■□□ 2.38
Cfap99A0A140LIX9 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
Cfap99A0A140LIX9 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Cfap99A0A140LIX9 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC29.88■■■□□ 2.37
Cfap99A0A140LIX9 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
Cfap99A0A140LIX9 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC29.87■■■□□ 2.37
Cfap99A0A140LIX9 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC29.87■■■□□ 2.37
Cfap99A0A140LIX9 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC29.86■■■□□ 2.37
Cfap99A0A140LIX9 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Cfap99A0A140LIX9 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC29.85■■■□□ 2.37
Cfap99A0A140LIX9 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC29.85■■■□□ 2.37
Cfap99A0A140LIX9 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC29.85■■■□□ 2.37
Cfap99A0A140LIX9 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
Cfap99A0A140LIX9 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC29.84■■■□□ 2.37
Cfap99A0A140LIX9 Gm9939-201ENSMUST00000067161 1154 ntBASIC29.84■■■□□ 2.37
Cfap99A0A140LIX9 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC29.84■■■□□ 2.37
Cfap99A0A140LIX9 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC29.82■■■□□ 2.36
Cfap99A0A140LIX9 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Cfap99A0A140LIX9 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC29.78■■■□□ 2.36
Cfap99A0A140LIX9 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC29.78■■■□□ 2.36
Cfap99A0A140LIX9 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
Cfap99A0A140LIX9 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Cfap99A0A140LIX9 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC29.76■■■□□ 2.35
Cfap99A0A140LIX9 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Cfap99A0A140LIX9 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC29.74■■■□□ 2.35
Cfap99A0A140LIX9 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
Cfap99A0A140LIX9 Gm43863-201ENSMUST00000203822 1192 ntBASIC29.73■■■□□ 2.35
Cfap99A0A140LIX9 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Cfap99A0A140LIX9 Gm8503-201ENSMUST00000118131 455 ntBASIC29.72■■■□□ 2.35
Cfap99A0A140LIX9 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Cfap99A0A140LIX9 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Cfap99A0A140LIX9 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
Cfap99A0A140LIX9 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC29.7■■■□□ 2.34
Cfap99A0A140LIX9 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC29.7■■■□□ 2.34
Cfap99A0A140LIX9 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
Cfap99A0A140LIX9 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Cfap99A0A140LIX9 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Cfap99A0A140LIX9 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Cfap99A0A140LIX9 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC29.65■■■□□ 2.34
Cfap99A0A140LIX9 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Cfap99A0A140LIX9 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC29.64■■■□□ 2.34
Cfap99A0A140LIX9 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC29.63■■■□□ 2.33
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms