Protein–RNA interactions for Protein: A0A140LIR9

Gm4881, Predicted gene 4881, mousemouse

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4881A0A140LIR9 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Gm4881A0A140LIR9 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Gm4881A0A140LIR9 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Gm4881A0A140LIR9 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Gm4881A0A140LIR9 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Gm4881A0A140LIR9 Gm6345-201ENSMUST00000180378 1691 ntBASIC22.11■■□□□ 1.13
Gm4881A0A140LIR9 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Gm4881A0A140LIR9 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Gm4881A0A140LIR9 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
Gm4881A0A140LIR9 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Gm4881A0A140LIR9 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Gm4881A0A140LIR9 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Gm4881A0A140LIR9 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Gm4881A0A140LIR9 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Gm4881A0A140LIR9 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Gm4881A0A140LIR9 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Gm4881A0A140LIR9 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC22.06■■□□□ 1.12
Gm4881A0A140LIR9 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC22.05■■□□□ 1.12
Gm4881A0A140LIR9 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC22.04■■□□□ 1.12
Gm4881A0A140LIR9 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Gm4881A0A140LIR9 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Gm4881A0A140LIR9 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Gm4881A0A140LIR9 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Gm4881A0A140LIR9 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC22.01■■□□□ 1.11
Gm4881A0A140LIR9 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC22.01■■□□□ 1.11
Gm4881A0A140LIR9 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC22.01■■□□□ 1.11
Gm4881A0A140LIR9 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Gm4881A0A140LIR9 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Gm4881A0A140LIR9 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Gm4881A0A140LIR9 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Gm4881A0A140LIR9 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Gm4881A0A140LIR9 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Gm4881A0A140LIR9 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Gm4881A0A140LIR9 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Gm4881A0A140LIR9 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Gm4881A0A140LIR9 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Gm4881A0A140LIR9 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
Gm4881A0A140LIR9 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.94■■□□□ 1.1
Gm4881A0A140LIR9 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Gm4881A0A140LIR9 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Gm4881A0A140LIR9 Gm30346-201ENSMUST00000218641 1699 ntBASIC21.93■■□□□ 1.1
Gm4881A0A140LIR9 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Gm4881A0A140LIR9 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Gm4881A0A140LIR9 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Gm4881A0A140LIR9 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Gm4881A0A140LIR9 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Gm4881A0A140LIR9 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Gm4881A0A140LIR9 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Gm4881A0A140LIR9 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
Gm4881A0A140LIR9 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Gm4881A0A140LIR9 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Gm4881A0A140LIR9 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Gm4881A0A140LIR9 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Gm4881A0A140LIR9 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Gm4881A0A140LIR9 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Gm4881A0A140LIR9 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Gm4881A0A140LIR9 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Gm4881A0A140LIR9 Zfp131-205ENSMUST00000223812 663 ntBASIC21.85■■□□□ 1.09
Gm4881A0A140LIR9 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.85■■□□□ 1.09
Gm4881A0A140LIR9 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21.84■■□□□ 1.09
Gm4881A0A140LIR9 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Gm4881A0A140LIR9 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Gm4881A0A140LIR9 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.83■■□□□ 1.09
Gm4881A0A140LIR9 Gm16148-201ENSMUST00000119653 893 ntBASIC21.83■■□□□ 1.09
Gm4881A0A140LIR9 Peli2-204ENSMUST00000226513 1320 ntBASIC21.82■■□□□ 1.08
Gm4881A0A140LIR9 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Gm4881A0A140LIR9 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Gm4881A0A140LIR9 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Gm4881A0A140LIR9 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Gm4881A0A140LIR9 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Gm4881A0A140LIR9 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Gm4881A0A140LIR9 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Gm4881A0A140LIR9 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Gm4881A0A140LIR9 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Gm4881A0A140LIR9 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Gm4881A0A140LIR9 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Gm4881A0A140LIR9 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Gm4881A0A140LIR9 Amer2-203ENSMUST00000225247 2662 ntBASIC21.76■■□□□ 1.07
Gm4881A0A140LIR9 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Gm4881A0A140LIR9 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Gm4881A0A140LIR9 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Gm4881A0A140LIR9 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Gm4881A0A140LIR9 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Gm4881A0A140LIR9 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Gm4881A0A140LIR9 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Gm4881A0A140LIR9 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Gm4881A0A140LIR9 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Gm4881A0A140LIR9 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.72■■□□□ 1.07
Gm4881A0A140LIR9 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.72■■□□□ 1.07
Gm4881A0A140LIR9 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Gm4881A0A140LIR9 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Gm4881A0A140LIR9 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Gm4881A0A140LIR9 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Gm4881A0A140LIR9 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Gm4881A0A140LIR9 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Gm4881A0A140LIR9 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Gm4881A0A140LIR9 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
Gm4881A0A140LIR9 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Gm4881A0A140LIR9 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.7■■□□□ 1.06
Gm4881A0A140LIR9 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.7■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms