Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav13d-4A0A0G2JFX3 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav13d-4A0A0G2JFX3 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav13d-4A0A0G2JFX3 AC166822.3-201ENSMUST00000227394 661 ntBASIC17.17■□□□□ 0.34
Trav13d-4A0A0G2JFX3 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
Trav13d-4A0A0G2JFX3 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav13d-4A0A0G2JFX3 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav13d-4A0A0G2JFX3 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav13d-4A0A0G2JFX3 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav13d-4A0A0G2JFX3 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trav13d-4A0A0G2JFX3 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trav13d-4A0A0G2JFX3 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav13d-4A0A0G2JFX3 Gm17082-201ENSMUST00000166043 1091 ntBASIC17.13■□□□□ 0.33
Trav13d-4A0A0G2JFX3 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC17.13■□□□□ 0.33
Trav13d-4A0A0G2JFX3 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav13d-4A0A0G2JFX3 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav13d-4A0A0G2JFX3 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav13d-4A0A0G2JFX3 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav13d-4A0A0G2JFX3 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav13d-4A0A0G2JFX3 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav13d-4A0A0G2JFX3 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav13d-4A0A0G2JFX3 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav13d-4A0A0G2JFX3 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
Trav13d-4A0A0G2JFX3 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trav13d-4A0A0G2JFX3 Amer2-203ENSMUST00000225247 2662 ntBASIC17.09■□□□□ 0.33
Trav13d-4A0A0G2JFX3 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav13d-4A0A0G2JFX3 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav13d-4A0A0G2JFX3 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Trav13d-4A0A0G2JFX3 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trav13d-4A0A0G2JFX3 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav13d-4A0A0G2JFX3 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav13d-4A0A0G2JFX3 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Trav13d-4A0A0G2JFX3 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Trav13d-4A0A0G2JFX3 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trav13d-4A0A0G2JFX3 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav13d-4A0A0G2JFX3 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav13d-4A0A0G2JFX3 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav13d-4A0A0G2JFX3 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav13d-4A0A0G2JFX3 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav13d-4A0A0G2JFX3 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
Trav13d-4A0A0G2JFX3 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav13d-4A0A0G2JFX3 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC17.04■□□□□ 0.32
Trav13d-4A0A0G2JFX3 Gm6345-201ENSMUST00000180378 1691 ntBASIC17.03■□□□□ 0.32
Trav13d-4A0A0G2JFX3 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav13d-4A0A0G2JFX3 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav13d-4A0A0G2JFX3 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav13d-4A0A0G2JFX3 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC17.02■□□□□ 0.31
Trav13d-4A0A0G2JFX3 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav13d-4A0A0G2JFX3 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC17.01■□□□□ 0.31
Trav13d-4A0A0G2JFX3 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav13d-4A0A0G2JFX3 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC17■□□□□ 0.31
Trav13d-4A0A0G2JFX3 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav13d-4A0A0G2JFX3 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
Trav13d-4A0A0G2JFX3 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav13d-4A0A0G2JFX3 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav13d-4A0A0G2JFX3 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav13d-4A0A0G2JFX3 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav13d-4A0A0G2JFX3 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Trav13d-4A0A0G2JFX3 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav13d-4A0A0G2JFX3 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav13d-4A0A0G2JFX3 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav13d-4A0A0G2JFX3 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav13d-4A0A0G2JFX3 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav13d-4A0A0G2JFX3 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.31
Trav13d-4A0A0G2JFX3 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trav13d-4A0A0G2JFX3 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Trav13d-4A0A0G2JFX3 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trav13d-4A0A0G2JFX3 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trav13d-4A0A0G2JFX3 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav13d-4A0A0G2JFX3 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC16.94■□□□□ 0.3
Trav13d-4A0A0G2JFX3 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav13d-4A0A0G2JFX3 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Trav13d-4A0A0G2JFX3 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav13d-4A0A0G2JFX3 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav13d-4A0A0G2JFX3 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Trav13d-4A0A0G2JFX3 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Trav13d-4A0A0G2JFX3 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav13d-4A0A0G2JFX3 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC16.92■□□□□ 0.3
Trav13d-4A0A0G2JFX3 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav13d-4A0A0G2JFX3 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Trav13d-4A0A0G2JFX3 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trav13d-4A0A0G2JFX3 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav13d-4A0A0G2JFX3 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav13d-4A0A0G2JFX3 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trav13d-4A0A0G2JFX3 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav13d-4A0A0G2JFX3 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trav13d-4A0A0G2JFX3 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC16.89■□□□□ 0.29
Trav13d-4A0A0G2JFX3 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav13d-4A0A0G2JFX3 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC16.88■□□□□ 0.29
Trav13d-4A0A0G2JFX3 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC16.88■□□□□ 0.29
Trav13d-4A0A0G2JFX3 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav13d-4A0A0G2JFX3 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav13d-4A0A0G2JFX3 Gm30346-201ENSMUST00000218641 1699 ntBASIC16.87■□□□□ 0.29
Trav13d-4A0A0G2JFX3 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav13d-4A0A0G2JFX3 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav13d-4A0A0G2JFX3 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav13d-4A0A0G2JFX3 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav13d-4A0A0G2JFX3 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav13d-4A0A0G2JFX3 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC16.85■□□□□ 0.29
Trav13d-4A0A0G2JFX3 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms