Protein–RNA interactions for Protein: A0A0A6YXQ0

Ighv8-8, Immunoglobulin heavy variable 8-8 (Fragment), mousemouse

Predictions only

Length 119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv8-8A0A0A6YXQ0 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Ighv8-8A0A0A6YXQ0 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ighv8-8A0A0A6YXQ0 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC18.39■□□□□ 0.53
Ighv8-8A0A0A6YXQ0 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Ighv8-8A0A0A6YXQ0 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ighv8-8A0A0A6YXQ0 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Ighv8-8A0A0A6YXQ0 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Ighv8-8A0A0A6YXQ0 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Ighv8-8A0A0A6YXQ0 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ighv8-8A0A0A6YXQ0 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
Ighv8-8A0A0A6YXQ0 Gm27322-201ENSMUST00000184007 104 ntBASIC18.37■□□□□ 0.53
Ighv8-8A0A0A6YXQ0 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ighv8-8A0A0A6YXQ0 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Ighv8-8A0A0A6YXQ0 AL845457.1-201ENSMUST00000197244 68 ntBASIC18.35■□□□□ 0.53
Ighv8-8A0A0A6YXQ0 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
Ighv8-8A0A0A6YXQ0 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Ighv8-8A0A0A6YXQ0 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ighv8-8A0A0A6YXQ0 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ighv8-8A0A0A6YXQ0 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ighv8-8A0A0A6YXQ0 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ighv8-8A0A0A6YXQ0 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ighv8-8A0A0A6YXQ0 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC18.33■□□□□ 0.52
Ighv8-8A0A0A6YXQ0 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ighv8-8A0A0A6YXQ0 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC18.32■□□□□ 0.52
Ighv8-8A0A0A6YXQ0 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ighv8-8A0A0A6YXQ0 Fezf2-202ENSMUST00000224023 1917 ntBASIC18.31■□□□□ 0.52
Ighv8-8A0A0A6YXQ0 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
Ighv8-8A0A0A6YXQ0 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ighv8-8A0A0A6YXQ0 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ighv8-8A0A0A6YXQ0 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ighv8-8A0A0A6YXQ0 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ighv8-8A0A0A6YXQ0 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ighv8-8A0A0A6YXQ0 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv8-8A0A0A6YXQ0 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv8-8A0A0A6YXQ0 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv8-8A0A0A6YXQ0 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv8-8A0A0A6YXQ0 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ighv8-8A0A0A6YXQ0 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ighv8-8A0A0A6YXQ0 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ighv8-8A0A0A6YXQ0 AC153890.1-201ENSMUST00000220021 2469 ntBASIC18.25■□□□□ 0.51
Ighv8-8A0A0A6YXQ0 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Ighv8-8A0A0A6YXQ0 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ighv8-8A0A0A6YXQ0 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ighv8-8A0A0A6YXQ0 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Ighv8-8A0A0A6YXQ0 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ighv8-8A0A0A6YXQ0 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ighv8-8A0A0A6YXQ0 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Ighv8-8A0A0A6YXQ0 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ighv8-8A0A0A6YXQ0 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ighv8-8A0A0A6YXQ0 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC18.2■□□□□ 0.5
Ighv8-8A0A0A6YXQ0 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ighv8-8A0A0A6YXQ0 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ighv8-8A0A0A6YXQ0 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv8-8A0A0A6YXQ0 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv8-8A0A0A6YXQ0 AC166822.3-201ENSMUST00000227394 661 ntBASIC18.17■□□□□ 0.5
Ighv8-8A0A0A6YXQ0 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv8-8A0A0A6YXQ0 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv8-8A0A0A6YXQ0 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv8-8A0A0A6YXQ0 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC18.15■□□□□ 0.5
Ighv8-8A0A0A6YXQ0 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv8-8A0A0A6YXQ0 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Ighv8-8A0A0A6YXQ0 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv8-8A0A0A6YXQ0 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC18.13■□□□□ 0.49
Ighv8-8A0A0A6YXQ0 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv8-8A0A0A6YXQ0 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv8-8A0A0A6YXQ0 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Ighv8-8A0A0A6YXQ0 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv8-8A0A0A6YXQ0 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv8-8A0A0A6YXQ0 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv8-8A0A0A6YXQ0 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv8-8A0A0A6YXQ0 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv8-8A0A0A6YXQ0 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv8-8A0A0A6YXQ0 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Ighv8-8A0A0A6YXQ0 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Ighv8-8A0A0A6YXQ0 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ighv8-8A0A0A6YXQ0 Mipep-204ENSMUST00000225043 1548 ntBASIC18.08■□□□□ 0.49
Ighv8-8A0A0A6YXQ0 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ighv8-8A0A0A6YXQ0 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Ighv8-8A0A0A6YXQ0 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ighv8-8A0A0A6YXQ0 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ighv8-8A0A0A6YXQ0 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Ighv8-8A0A0A6YXQ0 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC18.05■□□□□ 0.48
Ighv8-8A0A0A6YXQ0 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ighv8-8A0A0A6YXQ0 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ighv8-8A0A0A6YXQ0 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC18.04■□□□□ 0.48
Ighv8-8A0A0A6YXQ0 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ighv8-8A0A0A6YXQ0 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ighv8-8A0A0A6YXQ0 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ighv8-8A0A0A6YXQ0 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ighv8-8A0A0A6YXQ0 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ighv8-8A0A0A6YXQ0 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ighv8-8A0A0A6YXQ0 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv8-8A0A0A6YXQ0 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv8-8A0A0A6YXQ0 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv8-8A0A0A6YXQ0 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv8-8A0A0A6YXQ0 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv8-8A0A0A6YXQ0 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv8-8A0A0A6YXQ0 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ighv8-8A0A0A6YXQ0 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC17.98■□□□□ 0.47
Ighv8-8A0A0A6YXQ0 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms