Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trav5-4A0A075B652 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.9■□□□□ 0.94
Trav5-4A0A075B652 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trav5-4A0A075B652 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trav5-4A0A075B652 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
Trav5-4A0A075B652 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.89■□□□□ 0.93
Trav5-4A0A075B652 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trav5-4A0A075B652 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trav5-4A0A075B652 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Trav5-4A0A075B652 Peli2-204ENSMUST00000226513 1320 ntBASIC20.87■□□□□ 0.93
Trav5-4A0A075B652 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Trav5-4A0A075B652 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.85■□□□□ 0.93
Trav5-4A0A075B652 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.85■□□□□ 0.93
Trav5-4A0A075B652 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trav5-4A0A075B652 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Trav5-4A0A075B652 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trav5-4A0A075B652 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trav5-4A0A075B652 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Trav5-4A0A075B652 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trav5-4A0A075B652 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trav5-4A0A075B652 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.8■□□□□ 0.92
Trav5-4A0A075B652 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trav5-4A0A075B652 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Trav5-4A0A075B652 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trav5-4A0A075B652 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Trav5-4A0A075B652 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trav5-4A0A075B652 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.77■□□□□ 0.92
Trav5-4A0A075B652 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
Trav5-4A0A075B652 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.76■□□□□ 0.91
Trav5-4A0A075B652 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Trav5-4A0A075B652 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Trav5-4A0A075B652 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trav5-4A0A075B652 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trav5-4A0A075B652 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trav5-4A0A075B652 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trav5-4A0A075B652 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.73■□□□□ 0.91
Trav5-4A0A075B652 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trav5-4A0A075B652 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trav5-4A0A075B652 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.71■□□□□ 0.91
Trav5-4A0A075B652 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trav5-4A0A075B652 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trav5-4A0A075B652 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trav5-4A0A075B652 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.69■□□□□ 0.9
Trav5-4A0A075B652 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Trav5-4A0A075B652 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trav5-4A0A075B652 Gm24804-201ENSMUST00000174982 85 ntBASIC20.68■□□□□ 0.9
Trav5-4A0A075B652 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.67■□□□□ 0.9
Trav5-4A0A075B652 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Trav5-4A0A075B652 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trav5-4A0A075B652 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trav5-4A0A075B652 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trav5-4A0A075B652 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trav5-4A0A075B652 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trav5-4A0A075B652 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.65■□□□□ 0.9
Trav5-4A0A075B652 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trav5-4A0A075B652 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trav5-4A0A075B652 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Trav5-4A0A075B652 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trav5-4A0A075B652 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trav5-4A0A075B652 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trav5-4A0A075B652 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trav5-4A0A075B652 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trav5-4A0A075B652 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trav5-4A0A075B652 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trav5-4A0A075B652 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trav5-4A0A075B652 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Trav5-4A0A075B652 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.61■□□□□ 0.89
Trav5-4A0A075B652 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trav5-4A0A075B652 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Trav5-4A0A075B652 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Trav5-4A0A075B652 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Trav5-4A0A075B652 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trav5-4A0A075B652 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Trav5-4A0A075B652 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trav5-4A0A075B652 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trav5-4A0A075B652 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Trav5-4A0A075B652 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trav5-4A0A075B652 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trav5-4A0A075B652 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.55■□□□□ 0.88
Trav5-4A0A075B652 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trav5-4A0A075B652 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trav5-4A0A075B652 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trav5-4A0A075B652 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trav5-4A0A075B652 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Trav5-4A0A075B652 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trav5-4A0A075B652 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trav5-4A0A075B652 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Trav5-4A0A075B652 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trav5-4A0A075B652 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trav5-4A0A075B652 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trav5-4A0A075B652 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trav5-4A0A075B652 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trav5-4A0A075B652 Gm16148-201ENSMUST00000119653 893 ntBASIC20.49■□□□□ 0.87
Trav5-4A0A075B652 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trav5-4A0A075B652 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trav5-4A0A075B652 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.48■□□□□ 0.87
Trav5-4A0A075B652 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trav5-4A0A075B652 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.47■□□□□ 0.87
Trav5-4A0A075B652 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trav5-4A0A075B652 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 103.7 ms