Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav13-2A0A075B649 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav13-2A0A075B649 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.27
Trav13-2A0A075B649 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav13-2A0A075B649 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav13-2A0A075B649 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav13-2A0A075B649 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav13-2A0A075B649 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav13-2A0A075B649 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Trav13-2A0A075B649 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Trav13-2A0A075B649 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav13-2A0A075B649 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav13-2A0A075B649 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav13-2A0A075B649 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav13-2A0A075B649 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav13-2A0A075B649 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav13-2A0A075B649 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav13-2A0A075B649 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav13-2A0A075B649 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav13-2A0A075B649 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav13-2A0A075B649 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav13-2A0A075B649 Amer2-203ENSMUST00000225247 2662 ntBASIC16.7■□□□□ 0.26
Trav13-2A0A075B649 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
Trav13-2A0A075B649 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav13-2A0A075B649 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav13-2A0A075B649 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav13-2A0A075B649 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav13-2A0A075B649 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav13-2A0A075B649 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Trav13-2A0A075B649 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav13-2A0A075B649 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav13-2A0A075B649 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav13-2A0A075B649 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav13-2A0A075B649 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav13-2A0A075B649 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Trav13-2A0A075B649 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav13-2A0A075B649 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav13-2A0A075B649 Gm25262-201ENSMUST00000174934 133 ntBASIC16.62■□□□□ 0.25
Trav13-2A0A075B649 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav13-2A0A075B649 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC16.62■□□□□ 0.25
Trav13-2A0A075B649 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
Trav13-2A0A075B649 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav13-2A0A075B649 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav13-2A0A075B649 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav13-2A0A075B649 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Trav13-2A0A075B649 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Trav13-2A0A075B649 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC16.59■□□□□ 0.25
Trav13-2A0A075B649 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav13-2A0A075B649 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav13-2A0A075B649 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Trav13-2A0A075B649 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav13-2A0A075B649 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav13-2A0A075B649 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav13-2A0A075B649 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav13-2A0A075B649 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav13-2A0A075B649 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav13-2A0A075B649 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav13-2A0A075B649 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav13-2A0A075B649 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav13-2A0A075B649 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Trav13-2A0A075B649 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav13-2A0A075B649 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav13-2A0A075B649 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Trav13-2A0A075B649 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav13-2A0A075B649 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav13-2A0A075B649 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav13-2A0A075B649 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Trav13-2A0A075B649 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav13-2A0A075B649 Gm6345-201ENSMUST00000180378 1691 ntBASIC16.5■□□□□ 0.23
Trav13-2A0A075B649 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC16.5■□□□□ 0.23
Trav13-2A0A075B649 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav13-2A0A075B649 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav13-2A0A075B649 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav13-2A0A075B649 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav13-2A0A075B649 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav13-2A0A075B649 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav13-2A0A075B649 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav13-2A0A075B649 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Trav13-2A0A075B649 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Trav13-2A0A075B649 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav13-2A0A075B649 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Trav13-2A0A075B649 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav13-2A0A075B649 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC16.47■□□□□ 0.23
Trav13-2A0A075B649 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Trav13-2A0A075B649 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav13-2A0A075B649 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC16.47■□□□□ 0.23
Trav13-2A0A075B649 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav13-2A0A075B649 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav13-2A0A075B649 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC16.46■□□□□ 0.23
Trav13-2A0A075B649 AC166822.3-201ENSMUST00000227394 661 ntBASIC16.46■□□□□ 0.23
Trav13-2A0A075B649 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav13-2A0A075B649 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trav13-2A0A075B649 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav13-2A0A075B649 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav13-2A0A075B649 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trav13-2A0A075B649 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trav13-2A0A075B649 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav13-2A0A075B649 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav13-2A0A075B649 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Trav13-2A0A075B649 Gm27322-201ENSMUST00000184007 104 ntBASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms