Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGB3Q9Y5G1 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
PCDHGB3Q9Y5G1 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
PCDHGB3Q9Y5G1 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.5■□□□□ 0.87
PCDHGB3Q9Y5G1 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
PCDHGB3Q9Y5G1 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGB3Q9Y5G1 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.5■□□□□ 0.87
PCDHGB3Q9Y5G1 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGB3Q9Y5G1 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.5■□□□□ 0.87
PCDHGB3Q9Y5G1 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
PCDHGB3Q9Y5G1 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGB3Q9Y5G1 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
PCDHGB3Q9Y5G1 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGB3Q9Y5G1 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGB3Q9Y5G1 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGB3Q9Y5G1 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
PCDHGB3Q9Y5G1 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGB3Q9Y5G1 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.49■□□□□ 0.87
PCDHGB3Q9Y5G1 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.49■□□□□ 0.87
PCDHGB3Q9Y5G1 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGB3Q9Y5G1 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGB3Q9Y5G1 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGB3Q9Y5G1 AC087742.1-201ENST00000575880 1738 ntBASIC20.49■□□□□ 0.87
PCDHGB3Q9Y5G1 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGB3Q9Y5G1 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
PCDHGB3Q9Y5G1 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGB3Q9Y5G1 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.49■□□□□ 0.87
PCDHGB3Q9Y5G1 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGB3Q9Y5G1 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGB3Q9Y5G1 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGB3Q9Y5G1 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGB3Q9Y5G1 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGB3Q9Y5G1 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGB3Q9Y5G1 UNC93B3-201ENST00000308076 687 ntBASIC20.48■□□□□ 0.87
PCDHGB3Q9Y5G1 PBX2P1-201ENST00000493219 1291 ntBASIC20.48■□□□□ 0.87
PCDHGB3Q9Y5G1 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.48■□□□□ 0.87
PCDHGB3Q9Y5G1 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.48■□□□□ 0.87
PCDHGB3Q9Y5G1 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGB3Q9Y5G1 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGB3Q9Y5G1 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGB3Q9Y5G1 AL137060.1-201ENST00000618151 2648 ntBASIC20.48■□□□□ 0.87
PCDHGB3Q9Y5G1 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGB3Q9Y5G1 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGB3Q9Y5G1 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGB3Q9Y5G1 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGB3Q9Y5G1 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
PCDHGB3Q9Y5G1 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGB3Q9Y5G1 AC004687.1-201ENST00000579003 1625 ntBASIC20.47■□□□□ 0.87
PCDHGB3Q9Y5G1 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGB3Q9Y5G1 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGB3Q9Y5G1 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGB3Q9Y5G1 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.47■□□□□ 0.87
PCDHGB3Q9Y5G1 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGB3Q9Y5G1 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGB3Q9Y5G1 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.47■□□□□ 0.87
PCDHGB3Q9Y5G1 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
PCDHGB3Q9Y5G1 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGB3Q9Y5G1 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGB3Q9Y5G1 AC135279.3-201ENST00000610945 1311 ntBASIC20.47■□□□□ 0.87
PCDHGB3Q9Y5G1 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGB3Q9Y5G1 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.46■□□□□ 0.87
PCDHGB3Q9Y5G1 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHGB3Q9Y5G1 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHGB3Q9Y5G1 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHGB3Q9Y5G1 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHGB3Q9Y5G1 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHGB3Q9Y5G1 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHGB3Q9Y5G1 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHGB3Q9Y5G1 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHGB3Q9Y5G1 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHGB3Q9Y5G1 EDA-201ENST00000338901 1233 ntBASIC20.46■□□□□ 0.87
PCDHGB3Q9Y5G1 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHGB3Q9Y5G1 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.46■□□□□ 0.87
PCDHGB3Q9Y5G1 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.46■□□□□ 0.87
PCDHGB3Q9Y5G1 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.46■□□□□ 0.87
PCDHGB3Q9Y5G1 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.46■□□□□ 0.87
PCDHGB3Q9Y5G1 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.46■□□□□ 0.87
PCDHGB3Q9Y5G1 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.45■□□□□ 0.86
PCDHGB3Q9Y5G1 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHGB3Q9Y5G1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHGB3Q9Y5G1 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHGB3Q9Y5G1 FBXW4P1-201ENST00000426721 2239 ntBASIC20.45■□□□□ 0.86
PCDHGB3Q9Y5G1 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHGB3Q9Y5G1 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.45■□□□□ 0.86
PCDHGB3Q9Y5G1 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
PCDHGB3Q9Y5G1 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
PCDHGB3Q9Y5G1 AL136162.1-201ENST00000607711 1078 ntBASIC20.45■□□□□ 0.86
PCDHGB3Q9Y5G1 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHGB3Q9Y5G1 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHGB3Q9Y5G1 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHGB3Q9Y5G1 LINC01960-201ENST00000563759 1884 ntBASIC20.45■□□□□ 0.86
PCDHGB3Q9Y5G1 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHGB3Q9Y5G1 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
PCDHGB3Q9Y5G1 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHGB3Q9Y5G1 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHGB3Q9Y5G1 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
PCDHGB3Q9Y5G1 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.44■□□□□ 0.86
PCDHGB3Q9Y5G1 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
PCDHGB3Q9Y5G1 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.44■□□□□ 0.86
PCDHGB3Q9Y5G1 AC099791.2-201ENST00000605725 427 ntBASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms