Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
PCDHB9Q9Y5E1 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC22.02■■□□□ 1.12
PCDHB9Q9Y5E1 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHB9Q9Y5E1 VPS53-216ENST00000574029 585 ntTSL 4 BASIC22.02■■□□□ 1.12
PCDHB9Q9Y5E1 NTF6G-201ENST00000591094 616 ntBASIC22.02■■□□□ 1.12
PCDHB9Q9Y5E1 AC087239.1-201ENST00000622671 572 ntBASIC22.02■■□□□ 1.12
PCDHB9Q9Y5E1 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHB9Q9Y5E1 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHB9Q9Y5E1 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHB9Q9Y5E1 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
PCDHB9Q9Y5E1 GALC-202ENST00000393568 2054 ntTSL 2 BASIC22.02■■□□□ 1.11
PCDHB9Q9Y5E1 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.11
PCDHB9Q9Y5E1 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHB9Q9Y5E1 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
PCDHB9Q9Y5E1 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
PCDHB9Q9Y5E1 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHB9Q9Y5E1 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHB9Q9Y5E1 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC22.01■■□□□ 1.11
PCDHB9Q9Y5E1 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC22.01■■□□□ 1.11
PCDHB9Q9Y5E1 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC22.01■■□□□ 1.11
PCDHB9Q9Y5E1 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHB9Q9Y5E1 AL354811.1-201ENST00000610286 706 ntBASIC22.01■■□□□ 1.11
PCDHB9Q9Y5E1 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC22.01■■□□□ 1.11
PCDHB9Q9Y5E1 MIR6084-201ENST00000622012 110 ntBASIC22.01■■□□□ 1.11
PCDHB9Q9Y5E1 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
PCDHB9Q9Y5E1 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHB9Q9Y5E1 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHB9Q9Y5E1 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
PCDHB9Q9Y5E1 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
PCDHB9Q9Y5E1 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC22■■□□□ 1.11
PCDHB9Q9Y5E1 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC22■■□□□ 1.11
PCDHB9Q9Y5E1 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHB9Q9Y5E1 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC22■■□□□ 1.11
PCDHB9Q9Y5E1 MIR572-201ENST00000384983 95 ntBASIC22■■□□□ 1.11
PCDHB9Q9Y5E1 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC22■■□□□ 1.11
PCDHB9Q9Y5E1 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC22■■□□□ 1.11
PCDHB9Q9Y5E1 AC010141.3-201ENST00000456659 717 ntBASIC22■■□□□ 1.11
PCDHB9Q9Y5E1 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC22■■□□□ 1.11
PCDHB9Q9Y5E1 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC22■■□□□ 1.11
PCDHB9Q9Y5E1 AC012414.1-201ENST00000556676 535 ntBASIC22■■□□□ 1.11
PCDHB9Q9Y5E1 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHB9Q9Y5E1 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC22■■□□□ 1.11
PCDHB9Q9Y5E1 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.99■■□□□ 1.11
PCDHB9Q9Y5E1 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHB9Q9Y5E1 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHB9Q9Y5E1 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHB9Q9Y5E1 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.99■■□□□ 1.11
PCDHB9Q9Y5E1 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.99■■□□□ 1.11
PCDHB9Q9Y5E1 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.99■■□□□ 1.11
PCDHB9Q9Y5E1 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.99■■□□□ 1.11
PCDHB9Q9Y5E1 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHB9Q9Y5E1 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.99■■□□□ 1.11
PCDHB9Q9Y5E1 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.99■■□□□ 1.11
PCDHB9Q9Y5E1 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHB9Q9Y5E1 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHB9Q9Y5E1 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHB9Q9Y5E1 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHB9Q9Y5E1 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.98■■□□□ 1.11
PCDHB9Q9Y5E1 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHB9Q9Y5E1 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHB9Q9Y5E1 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHB9Q9Y5E1 CCDC92B-201ENST00000575506 885 ntBASIC21.98■■□□□ 1.11
PCDHB9Q9Y5E1 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
PCDHB9Q9Y5E1 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHB9Q9Y5E1 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHB9Q9Y5E1 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.98■■□□□ 1.11
PCDHB9Q9Y5E1 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHB9Q9Y5E1 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHB9Q9Y5E1 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHB9Q9Y5E1 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHB9Q9Y5E1 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHB9Q9Y5E1 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHB9Q9Y5E1 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.97■■□□□ 1.11
PCDHB9Q9Y5E1 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHB9Q9Y5E1 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHB9Q9Y5E1 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHB9Q9Y5E1 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHB9Q9Y5E1 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHB9Q9Y5E1 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
PCDHB9Q9Y5E1 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.97■■□□□ 1.11
PCDHB9Q9Y5E1 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHB9Q9Y5E1 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
PCDHB9Q9Y5E1 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHB9Q9Y5E1 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHB9Q9Y5E1 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
PCDHB9Q9Y5E1 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHB9Q9Y5E1 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHB9Q9Y5E1 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHB9Q9Y5E1 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHB9Q9Y5E1 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.96■■□□□ 1.11
PCDHB9Q9Y5E1 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.96■■□□□ 1.11
PCDHB9Q9Y5E1 KRT18P14-201ENST00000534205 1250 ntBASIC21.96■■□□□ 1.11
PCDHB9Q9Y5E1 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.96■■□□□ 1.11
PCDHB9Q9Y5E1 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHB9Q9Y5E1 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.96■■□□□ 1.11
PCDHB9Q9Y5E1 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHB9Q9Y5E1 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
PCDHB9Q9Y5E1 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.95■■□□□ 1.1
PCDHB9Q9Y5E1 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHB9Q9Y5E1 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms