Protein–RNA interactions for Protein: Q9Y4C1

KDM3A, Lysine-specific demethylase 3A, humanhuman

Predictions only

Length 1,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3AQ9Y4C1 AL354811.1-201ENST00000610286 706 ntBASIC24.46■■□□□ 1.51
KDM3AQ9Y4C1 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC24.46■■□□□ 1.51
KDM3AQ9Y4C1 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
KDM3AQ9Y4C1 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
KDM3AQ9Y4C1 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
KDM3AQ9Y4C1 AC137767.1-201ENST00000602918 1920 ntBASIC24.45■■□□□ 1.51
KDM3AQ9Y4C1 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.51
KDM3AQ9Y4C1 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
KDM3AQ9Y4C1 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
KDM3AQ9Y4C1 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
KDM3AQ9Y4C1 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC24.45■■□□□ 1.5
KDM3AQ9Y4C1 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
KDM3AQ9Y4C1 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC24.45■■□□□ 1.5
KDM3AQ9Y4C1 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
KDM3AQ9Y4C1 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC24.45■■□□□ 1.5
KDM3AQ9Y4C1 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
KDM3AQ9Y4C1 TERT-206ENST00000508104 2486 ntTSL 5 BASIC24.44■■□□□ 1.5
KDM3AQ9Y4C1 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC24.44■■□□□ 1.5
KDM3AQ9Y4C1 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
KDM3AQ9Y4C1 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC24.44■■□□□ 1.5
KDM3AQ9Y4C1 AC010141.3-201ENST00000456659 717 ntBASIC24.44■■□□□ 1.5
KDM3AQ9Y4C1 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC24.44■■□□□ 1.5
KDM3AQ9Y4C1 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC24.44■■□□□ 1.5
KDM3AQ9Y4C1 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
KDM3AQ9Y4C1 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
KDM3AQ9Y4C1 RAB43-208ENST00000615093 783 ntTSL 5 BASIC24.44■■□□□ 1.5
KDM3AQ9Y4C1 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
KDM3AQ9Y4C1 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
KDM3AQ9Y4C1 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
KDM3AQ9Y4C1 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
KDM3AQ9Y4C1 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC24.43■■□□□ 1.5
KDM3AQ9Y4C1 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
KDM3AQ9Y4C1 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC24.43■■□□□ 1.5
KDM3AQ9Y4C1 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
KDM3AQ9Y4C1 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
KDM3AQ9Y4C1 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC24.43■■□□□ 1.5
KDM3AQ9Y4C1 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC24.43■■□□□ 1.5
KDM3AQ9Y4C1 ECEL1P1-201ENST00000373592 1742 ntBASIC24.42■■□□□ 1.5
KDM3AQ9Y4C1 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
KDM3AQ9Y4C1 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
KDM3AQ9Y4C1 HACD1-201ENST00000326961 773 ntTSL 2 BASIC24.42■■□□□ 1.5
KDM3AQ9Y4C1 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
KDM3AQ9Y4C1 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
KDM3AQ9Y4C1 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC24.42■■□□□ 1.5
KDM3AQ9Y4C1 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
KDM3AQ9Y4C1 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC24.42■■□□□ 1.5
KDM3AQ9Y4C1 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
KDM3AQ9Y4C1 AC080038.3-201ENST00000623346 1952 ntBASIC24.42■■□□□ 1.5
KDM3AQ9Y4C1 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
KDM3AQ9Y4C1 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC24.41■■□□□ 1.5
KDM3AQ9Y4C1 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
KDM3AQ9Y4C1 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC24.41■■□□□ 1.5
KDM3AQ9Y4C1 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
KDM3AQ9Y4C1 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
KDM3AQ9Y4C1 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
KDM3AQ9Y4C1 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
KDM3AQ9Y4C1 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC24.4■■□□□ 1.5
KDM3AQ9Y4C1 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
KDM3AQ9Y4C1 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
KDM3AQ9Y4C1 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
KDM3AQ9Y4C1 DUX4L2-201ENST00000561772 1275 ntBASIC24.4■■□□□ 1.5
KDM3AQ9Y4C1 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC24.4■■□□□ 1.5
KDM3AQ9Y4C1 DUX4L6-201ENST00000626483 1275 ntBASIC24.4■■□□□ 1.5
KDM3AQ9Y4C1 DUX4L1-201ENST00000627662 1275 ntBASIC24.4■■□□□ 1.5
KDM3AQ9Y4C1 DUX4L8-201ENST00000629013 1275 ntBASIC24.4■■□□□ 1.5
KDM3AQ9Y4C1 DUX4L3-201ENST00000630187 1275 ntBASIC24.4■■□□□ 1.5
KDM3AQ9Y4C1 DUX4L7-201ENST00000630678 1275 ntBASIC24.4■■□□□ 1.5
KDM3AQ9Y4C1 DUX4L5-201ENST00000630834 1275 ntBASIC24.4■■□□□ 1.5
KDM3AQ9Y4C1 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
KDM3AQ9Y4C1 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
KDM3AQ9Y4C1 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
KDM3AQ9Y4C1 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
KDM3AQ9Y4C1 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
KDM3AQ9Y4C1 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
KDM3AQ9Y4C1 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
KDM3AQ9Y4C1 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC24.39■■□□□ 1.5
KDM3AQ9Y4C1 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC24.39■■□□□ 1.5
KDM3AQ9Y4C1 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC24.39■■□□□ 1.5
KDM3AQ9Y4C1 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC24.39■■□□□ 1.5
KDM3AQ9Y4C1 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC24.39■■□□□ 1.5
KDM3AQ9Y4C1 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
KDM3AQ9Y4C1 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
KDM3AQ9Y4C1 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
KDM3AQ9Y4C1 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
KDM3AQ9Y4C1 AC139530.1-201ENST00000575312 1977 ntBASIC24.39■■□□□ 1.49
KDM3AQ9Y4C1 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
KDM3AQ9Y4C1 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
KDM3AQ9Y4C1 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.49
KDM3AQ9Y4C1 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC24.38■■□□□ 1.49
KDM3AQ9Y4C1 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC24.38■■□□□ 1.49
KDM3AQ9Y4C1 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
KDM3AQ9Y4C1 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
KDM3AQ9Y4C1 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC24.38■■□□□ 1.49
KDM3AQ9Y4C1 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC24.38■■□□□ 1.49
KDM3AQ9Y4C1 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
KDM3AQ9Y4C1 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC24.38■■□□□ 1.49
KDM3AQ9Y4C1 AC079089.2-201ENST00000531211 1277 ntBASIC24.38■■□□□ 1.49
KDM3AQ9Y4C1 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
KDM3AQ9Y4C1 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
KDM3AQ9Y4C1 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC24.38■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms