Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
NINLQ9Y2I6 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC29.83■■■□□ 2.37
NINLQ9Y2I6 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
NINLQ9Y2I6 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC29.82■■■□□ 2.36
NINLQ9Y2I6 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
NINLQ9Y2I6 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
NINLQ9Y2I6 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
NINLQ9Y2I6 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC29.82■■■□□ 2.36
NINLQ9Y2I6 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC29.82■■■□□ 2.36
NINLQ9Y2I6 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC29.82■■■□□ 2.36
NINLQ9Y2I6 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC29.82■■■□□ 2.36
NINLQ9Y2I6 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC29.82■■■□□ 2.36
NINLQ9Y2I6 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
NINLQ9Y2I6 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC29.81■■■□□ 2.36
NINLQ9Y2I6 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
NINLQ9Y2I6 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC29.81■■■□□ 2.36
NINLQ9Y2I6 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC29.81■■■□□ 2.36
NINLQ9Y2I6 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC29.81■■■□□ 2.36
NINLQ9Y2I6 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC29.81■■■□□ 2.36
NINLQ9Y2I6 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
NINLQ9Y2I6 KRT87P-202ENST00000534226 1464 ntBASIC29.81■■■□□ 2.36
NINLQ9Y2I6 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC29.81■■■□□ 2.36
NINLQ9Y2I6 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
NINLQ9Y2I6 HSCB-202ENST00000398941 955 ntTSL 2 BASIC29.8■■■□□ 2.36
NINLQ9Y2I6 KRT19P1-201ENST00000405746 1186 ntBASIC29.8■■■□□ 2.36
NINLQ9Y2I6 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
NINLQ9Y2I6 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
NINLQ9Y2I6 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC29.8■■■□□ 2.36
NINLQ9Y2I6 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC29.79■■■□□ 2.36
NINLQ9Y2I6 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC29.79■■■□□ 2.36
NINLQ9Y2I6 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC29.79■■■□□ 2.36
NINLQ9Y2I6 VPS53-216ENST00000574029 585 ntTSL 4 BASIC29.79■■■□□ 2.36
NINLQ9Y2I6 NFE2L3P1-201ENST00000588207 1959 ntBASIC29.79■■■□□ 2.36
NINLQ9Y2I6 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC29.78■■■□□ 2.36
NINLQ9Y2I6 DBI-210ENST00000542275 757 ntTSL 5 BASIC29.78■■■□□ 2.36
NINLQ9Y2I6 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC29.78■■■□□ 2.36
NINLQ9Y2I6 AL034346.1-201ENST00000568244 1277 ntBASIC29.78■■■□□ 2.36
NINLQ9Y2I6 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC29.78■■■□□ 2.36
NINLQ9Y2I6 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
NINLQ9Y2I6 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
NINLQ9Y2I6 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC29.78■■■□□ 2.36
NINLQ9Y2I6 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC29.78■■■□□ 2.36
NINLQ9Y2I6 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC29.78■■■□□ 2.36
NINLQ9Y2I6 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
NINLQ9Y2I6 AC055733.4-201ENST00000638462 1354 ntBASIC29.78■■■□□ 2.36
NINLQ9Y2I6 STX7-201ENST00000367937 1090 ntTSL 5 BASIC29.77■■■□□ 2.36
NINLQ9Y2I6 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC29.77■■■□□ 2.36
NINLQ9Y2I6 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC29.77■■■□□ 2.36
NINLQ9Y2I6 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC29.77■■■□□ 2.36
NINLQ9Y2I6 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
NINLQ9Y2I6 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
NINLQ9Y2I6 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC29.77■■■□□ 2.36
NINLQ9Y2I6 GAS2L1P2-201ENST00000436355 1356 ntBASIC29.77■■■□□ 2.36
NINLQ9Y2I6 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
NINLQ9Y2I6 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
NINLQ9Y2I6 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
NINLQ9Y2I6 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
NINLQ9Y2I6 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
NINLQ9Y2I6 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC29.76■■■□□ 2.35
NINLQ9Y2I6 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
NINLQ9Y2I6 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
NINLQ9Y2I6 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC29.76■■■□□ 2.35
NINLQ9Y2I6 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
NINLQ9Y2I6 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC29.76■■■□□ 2.35
NINLQ9Y2I6 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC29.76■■■□□ 2.35
NINLQ9Y2I6 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC29.76■■■□□ 2.35
NINLQ9Y2I6 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC29.76■■■□□ 2.35
NINLQ9Y2I6 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC29.76■■■□□ 2.35
NINLQ9Y2I6 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC29.76■■■□□ 2.35
NINLQ9Y2I6 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC29.76■■■□□ 2.35
NINLQ9Y2I6 LINC00526-201ENST00000581067 1875 ntBASIC29.76■■■□□ 2.35
NINLQ9Y2I6 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC29.76■■■□□ 2.35
NINLQ9Y2I6 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC29.75■■■□□ 2.35
NINLQ9Y2I6 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC29.75■■■□□ 2.35
NINLQ9Y2I6 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
NINLQ9Y2I6 AC137761.2-201ENST00000561729 223 ntBASIC29.75■■■□□ 2.35
NINLQ9Y2I6 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC29.75■■■□□ 2.35
NINLQ9Y2I6 AC145350.3-201ENST00000569033 163 ntBASIC29.75■■■□□ 2.35
NINLQ9Y2I6 WWOX-218ENST00000627394 894 ntTSL 5 BASIC29.75■■■□□ 2.35
NINLQ9Y2I6 AC087742.1-201ENST00000575880 1738 ntBASIC29.75■■■□□ 2.35
NINLQ9Y2I6 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC29.75■■■□□ 2.35
NINLQ9Y2I6 OR7E47P-201ENST00000546390 1422 ntBASIC29.74■■■□□ 2.35
NINLQ9Y2I6 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC29.74■■■□□ 2.35
NINLQ9Y2I6 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC29.74■■■□□ 2.35
NINLQ9Y2I6 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
NINLQ9Y2I6 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC29.74■■■□□ 2.35
NINLQ9Y2I6 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC29.74■■■□□ 2.35
NINLQ9Y2I6 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC29.74■■■□□ 2.35
NINLQ9Y2I6 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC29.74■■■□□ 2.35
NINLQ9Y2I6 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
NINLQ9Y2I6 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC29.73■■■□□ 2.35
NINLQ9Y2I6 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC29.73■■■□□ 2.35
NINLQ9Y2I6 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
NINLQ9Y2I6 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
NINLQ9Y2I6 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
NINLQ9Y2I6 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
NINLQ9Y2I6 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC29.73■■■□□ 2.35
NINLQ9Y2I6 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
NINLQ9Y2I6 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC29.72■■■□□ 2.35
NINLQ9Y2I6 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms