Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF6Q9Y252 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.32■□□□□ 0.84
RNF6Q9Y252 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF6Q9Y252 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF6Q9Y252 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.32■□□□□ 0.84
RNF6Q9Y252 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF6Q9Y252 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RNF6Q9Y252 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF6Q9Y252 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.31■□□□□ 0.84
RNF6Q9Y252 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RNF6Q9Y252 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF6Q9Y252 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.31■□□□□ 0.84
RNF6Q9Y252 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.31■□□□□ 0.84
RNF6Q9Y252 MIR4767-201ENST00000582827 78 ntBASIC20.31■□□□□ 0.84
RNF6Q9Y252 MIR5787-201ENST00000611784 55 ntBASIC20.31■□□□□ 0.84
RNF6Q9Y252 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
RNF6Q9Y252 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.31■□□□□ 0.84
RNF6Q9Y252 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.31■□□□□ 0.84
RNF6Q9Y252 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF6Q9Y252 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
RNF6Q9Y252 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RNF6Q9Y252 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RNF6Q9Y252 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF6Q9Y252 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.3■□□□□ 0.84
RNF6Q9Y252 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF6Q9Y252 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF6Q9Y252 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF6Q9Y252 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF6Q9Y252 SERBP1P1-201ENST00000396021 1160 ntBASIC20.3■□□□□ 0.84
RNF6Q9Y252 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.3■□□□□ 0.84
RNF6Q9Y252 AC091305.1-201ENST00000479476 895 ntBASIC20.3■□□□□ 0.84
RNF6Q9Y252 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.3■□□□□ 0.84
RNF6Q9Y252 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.3■□□□□ 0.84
RNF6Q9Y252 AC099791.2-201ENST00000605725 427 ntBASIC20.3■□□□□ 0.84
RNF6Q9Y252 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.3■□□□□ 0.84
RNF6Q9Y252 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF6Q9Y252 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF6Q9Y252 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF6Q9Y252 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.3■□□□□ 0.84
RNF6Q9Y252 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.3■□□□□ 0.84
RNF6Q9Y252 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF6Q9Y252 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF6Q9Y252 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
RNF6Q9Y252 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF6Q9Y252 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF6Q9Y252 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF6Q9Y252 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
RNF6Q9Y252 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF6Q9Y252 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.29■□□□□ 0.84
RNF6Q9Y252 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
RNF6Q9Y252 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF6Q9Y252 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.29■□□□□ 0.84
RNF6Q9Y252 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF6Q9Y252 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF6Q9Y252 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF6Q9Y252 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF6Q9Y252 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.28■□□□□ 0.84
RNF6Q9Y252 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF6Q9Y252 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF6Q9Y252 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF6Q9Y252 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RNF6Q9Y252 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.28■□□□□ 0.84
RNF6Q9Y252 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.28■□□□□ 0.84
RNF6Q9Y252 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.28■□□□□ 0.84
RNF6Q9Y252 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RNF6Q9Y252 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF6Q9Y252 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RNF6Q9Y252 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF6Q9Y252 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF6Q9Y252 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF6Q9Y252 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.27■□□□□ 0.84
RNF6Q9Y252 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF6Q9Y252 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.27■□□□□ 0.84
RNF6Q9Y252 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RNF6Q9Y252 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF6Q9Y252 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF6Q9Y252 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RNF6Q9Y252 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF6Q9Y252 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF6Q9Y252 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RNF6Q9Y252 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.27■□□□□ 0.84
RNF6Q9Y252 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RNF6Q9Y252 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
RNF6Q9Y252 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
RNF6Q9Y252 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF6Q9Y252 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RNF6Q9Y252 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
RNF6Q9Y252 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
RNF6Q9Y252 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF6Q9Y252 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RNF6Q9Y252 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF6Q9Y252 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF6Q9Y252 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RNF6Q9Y252 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
RNF6Q9Y252 AC104564.3-201ENST00000582367 638 ntBASIC20.26■□□□□ 0.83
RNF6Q9Y252 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.26■□□□□ 0.83
RNF6Q9Y252 CA15P2-201ENST00000611168 834 ntBASIC20.26■□□□□ 0.83
RNF6Q9Y252 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.26■□□□□ 0.83
RNF6Q9Y252 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
RNF6Q9Y252 AC009102.2-201ENST00000606772 1639 ntBASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms