Protein–RNA interactions for Protein: Q9UN73

PCDHA6, Protocadherin alpha-6, humanhuman

Predictions only

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6Q9UN73 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC24.9■■□□□ 1.58
PCDHA6Q9UN73 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC24.9■■□□□ 1.58
PCDHA6Q9UN73 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHA6Q9UN73 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHA6Q9UN73 AC079089.2-201ENST00000531211 1277 ntBASIC24.9■■□□□ 1.58
PCDHA6Q9UN73 AL354811.1-201ENST00000610286 706 ntBASIC24.9■■□□□ 1.58
PCDHA6Q9UN73 AC139530.1-201ENST00000575312 1977 ntBASIC24.9■■□□□ 1.58
PCDHA6Q9UN73 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
PCDHA6Q9UN73 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC24.9■■□□□ 1.58
PCDHA6Q9UN73 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHA6Q9UN73 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
PCDHA6Q9UN73 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.58
PCDHA6Q9UN73 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC24.89■■□□□ 1.58
PCDHA6Q9UN73 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC24.89■■□□□ 1.58
PCDHA6Q9UN73 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
PCDHA6Q9UN73 MIR6821-201ENST00000617625 74 ntBASIC24.89■■□□□ 1.58
PCDHA6Q9UN73 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.57
PCDHA6Q9UN73 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
PCDHA6Q9UN73 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
PCDHA6Q9UN73 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHA6Q9UN73 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC24.88■■□□□ 1.57
PCDHA6Q9UN73 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHA6Q9UN73 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
PCDHA6Q9UN73 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC24.88■■□□□ 1.57
PCDHA6Q9UN73 LINC00526-201ENST00000581067 1875 ntBASIC24.88■■□□□ 1.57
PCDHA6Q9UN73 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHA6Q9UN73 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHA6Q9UN73 AC097381.1-201ENST00000429019 1296 ntBASIC24.88■■□□□ 1.57
PCDHA6Q9UN73 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC24.88■■□□□ 1.57
PCDHA6Q9UN73 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHA6Q9UN73 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHA6Q9UN73 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHA6Q9UN73 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
PCDHA6Q9UN73 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
PCDHA6Q9UN73 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC24.87■■□□□ 1.57
PCDHA6Q9UN73 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
PCDHA6Q9UN73 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC24.87■■□□□ 1.57
PCDHA6Q9UN73 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC24.87■■□□□ 1.57
PCDHA6Q9UN73 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC24.87■■□□□ 1.57
PCDHA6Q9UN73 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC24.87■■□□□ 1.57
PCDHA6Q9UN73 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC24.87■■□□□ 1.57
PCDHA6Q9UN73 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
PCDHA6Q9UN73 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
PCDHA6Q9UN73 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC24.87■■□□□ 1.57
PCDHA6Q9UN73 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC24.87■■□□□ 1.57
PCDHA6Q9UN73 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHA6Q9UN73 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC24.86■■□□□ 1.57
PCDHA6Q9UN73 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC24.86■■□□□ 1.57
PCDHA6Q9UN73 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHA6Q9UN73 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
PCDHA6Q9UN73 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC24.86■■□□□ 1.57
PCDHA6Q9UN73 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHA6Q9UN73 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC24.86■■□□□ 1.57
PCDHA6Q9UN73 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHA6Q9UN73 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHA6Q9UN73 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC24.86■■□□□ 1.57
PCDHA6Q9UN73 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHA6Q9UN73 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHA6Q9UN73 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHA6Q9UN73 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
PCDHA6Q9UN73 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHA6Q9UN73 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHA6Q9UN73 AC027612.3-201ENST00000413684 1047 ntBASIC24.85■■□□□ 1.57
PCDHA6Q9UN73 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC24.85■■□□□ 1.57
PCDHA6Q9UN73 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC24.85■■□□□ 1.57
PCDHA6Q9UN73 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC24.85■■□□□ 1.57
PCDHA6Q9UN73 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHA6Q9UN73 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHA6Q9UN73 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC24.84■■□□□ 1.57
PCDHA6Q9UN73 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHA6Q9UN73 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHA6Q9UN73 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHA6Q9UN73 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHA6Q9UN73 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHA6Q9UN73 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHA6Q9UN73 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC24.84■■□□□ 1.57
PCDHA6Q9UN73 SMUG1P1-201ENST00000590640 811 ntBASIC24.84■■□□□ 1.57
PCDHA6Q9UN73 AC087623.3-201ENST00000607047 1098 ntBASIC24.84■■□□□ 1.57
PCDHA6Q9UN73 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
PCDHA6Q9UN73 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHA6Q9UN73 MPST-204ENST00000404393 1329 ntTSL 5 BASIC24.84■■□□□ 1.57
PCDHA6Q9UN73 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHA6Q9UN73 AL117328.2-201ENST00000624617 1940 ntBASIC24.83■■□□□ 1.57
PCDHA6Q9UN73 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
PCDHA6Q9UN73 YBX1P1-201ENST00000445822 960 ntBASIC24.83■■□□□ 1.57
PCDHA6Q9UN73 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC24.83■■□□□ 1.57
PCDHA6Q9UN73 PLD4-205ENST00000553861 667 ntTSL 2 BASIC24.83■■□□□ 1.57
PCDHA6Q9UN73 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC24.83■■□□□ 1.57
PCDHA6Q9UN73 AC242852.2-201ENST00000615738 1807 ntBASIC24.83■■□□□ 1.57
PCDHA6Q9UN73 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.56
PCDHA6Q9UN73 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.56
PCDHA6Q9UN73 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
PCDHA6Q9UN73 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC24.82■■□□□ 1.56
PCDHA6Q9UN73 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC24.82■■□□□ 1.56
PCDHA6Q9UN73 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC24.82■■□□□ 1.56
PCDHA6Q9UN73 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC24.82■■□□□ 1.56
PCDHA6Q9UN73 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
PCDHA6Q9UN73 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC24.82■■□□□ 1.56
PCDHA6Q9UN73 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC24.81■■□□□ 1.56
PCDHA6Q9UN73 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC24.81■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms