Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.96■□□□□ 0.47
LIN7CQ9NUP9 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LIN7CQ9NUP9 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LIN7CQ9NUP9 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LIN7CQ9NUP9 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
LIN7CQ9NUP9 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
LIN7CQ9NUP9 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LIN7CQ9NUP9 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LIN7CQ9NUP9 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC17.95■□□□□ 0.46
LIN7CQ9NUP9 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
LIN7CQ9NUP9 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC17.95■□□□□ 0.46
LIN7CQ9NUP9 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
LIN7CQ9NUP9 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC17.95■□□□□ 0.46
LIN7CQ9NUP9 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC17.95■□□□□ 0.46
LIN7CQ9NUP9 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LIN7CQ9NUP9 DUX4L4-201ENST00000566884 1269 ntBASIC17.95■□□□□ 0.46
LIN7CQ9NUP9 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LIN7CQ9NUP9 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
LIN7CQ9NUP9 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
LIN7CQ9NUP9 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LIN7CQ9NUP9 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.95■□□□□ 0.46
LIN7CQ9NUP9 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LIN7CQ9NUP9 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LIN7CQ9NUP9 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
LIN7CQ9NUP9 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LIN7CQ9NUP9 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LIN7CQ9NUP9 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LIN7CQ9NUP9 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.94■□□□□ 0.46
LIN7CQ9NUP9 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.94■□□□□ 0.46
LIN7CQ9NUP9 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LIN7CQ9NUP9 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.94■□□□□ 0.46
LIN7CQ9NUP9 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.94■□□□□ 0.46
LIN7CQ9NUP9 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LIN7CQ9NUP9 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LIN7CQ9NUP9 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC17.94■□□□□ 0.46
LIN7CQ9NUP9 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.94■□□□□ 0.46
LIN7CQ9NUP9 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LIN7CQ9NUP9 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
LIN7CQ9NUP9 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LIN7CQ9NUP9 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.94■□□□□ 0.46
LIN7CQ9NUP9 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
LIN7CQ9NUP9 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LIN7CQ9NUP9 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LIN7CQ9NUP9 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LIN7CQ9NUP9 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LIN7CQ9NUP9 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LIN7CQ9NUP9 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
LIN7CQ9NUP9 AC131281.2-201ENST00000520478 145 ntBASIC17.93■□□□□ 0.46
LIN7CQ9NUP9 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LIN7CQ9NUP9 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.93■□□□□ 0.46
LIN7CQ9NUP9 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.93■□□□□ 0.46
LIN7CQ9NUP9 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.93■□□□□ 0.46
LIN7CQ9NUP9 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LIN7CQ9NUP9 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LIN7CQ9NUP9 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LIN7CQ9NUP9 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC17.93■□□□□ 0.46
LIN7CQ9NUP9 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LIN7CQ9NUP9 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LIN7CQ9NUP9 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LIN7CQ9NUP9 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.92■□□□□ 0.46
LIN7CQ9NUP9 AL137060.1-201ENST00000618151 2648 ntBASIC17.92■□□□□ 0.46
LIN7CQ9NUP9 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LIN7CQ9NUP9 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LIN7CQ9NUP9 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LIN7CQ9NUP9 AC009102.2-201ENST00000606772 1639 ntBASIC17.92■□□□□ 0.46
LIN7CQ9NUP9 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC17.92■□□□□ 0.46
LIN7CQ9NUP9 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC17.92■□□□□ 0.46
LIN7CQ9NUP9 AL512631.2-201ENST00000604634 923 ntBASIC17.92■□□□□ 0.46
LIN7CQ9NUP9 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
LIN7CQ9NUP9 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
LIN7CQ9NUP9 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LIN7CQ9NUP9 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LIN7CQ9NUP9 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LIN7CQ9NUP9 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LIN7CQ9NUP9 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LIN7CQ9NUP9 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
LIN7CQ9NUP9 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LIN7CQ9NUP9 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
LIN7CQ9NUP9 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LIN7CQ9NUP9 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LIN7CQ9NUP9 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LIN7CQ9NUP9 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LIN7CQ9NUP9 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LIN7CQ9NUP9 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LIN7CQ9NUP9 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LIN7CQ9NUP9 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LIN7CQ9NUP9 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.91■□□□□ 0.46
LIN7CQ9NUP9 AC008406.3-201ENST00000620001 1374 ntBASIC17.91■□□□□ 0.46
LIN7CQ9NUP9 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LIN7CQ9NUP9 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
LIN7CQ9NUP9 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
LIN7CQ9NUP9 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LIN7CQ9NUP9 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
LIN7CQ9NUP9 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
LIN7CQ9NUP9 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC17.9■□□□□ 0.46
LIN7CQ9NUP9 ASB1-202ENST00000409297 878 ntTSL 5 BASIC17.9■□□□□ 0.46
LIN7CQ9NUP9 QDPR-206ENST00000508623 601 ntTSL 3 BASIC17.9■□□□□ 0.46
LIN7CQ9NUP9 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LIN7CQ9NUP9 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC17.9■□□□□ 0.46
LIN7CQ9NUP9 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms