Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC25.8■■□□□ 1.72
DDX4Q9NQI0 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC25.8■■□□□ 1.72
DDX4Q9NQI0 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC25.8■■□□□ 1.72
DDX4Q9NQI0 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
DDX4Q9NQI0 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
DDX4Q9NQI0 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
DDX4Q9NQI0 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC25.79■■□□□ 1.72
DDX4Q9NQI0 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC25.79■■□□□ 1.72
DDX4Q9NQI0 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC25.79■■□□□ 1.72
DDX4Q9NQI0 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC25.79■■□□□ 1.72
DDX4Q9NQI0 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC25.79■■□□□ 1.72
DDX4Q9NQI0 GXYLT1P5-201ENST00000614548 1189 ntBASIC25.79■■□□□ 1.72
DDX4Q9NQI0 AC011767.1-201ENST00000617410 1153 ntBASIC25.79■■□□□ 1.72
DDX4Q9NQI0 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
DDX4Q9NQI0 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
DDX4Q9NQI0 AC009237.3-201ENST00000393279 1427 ntBASIC25.79■■□□□ 1.72
DDX4Q9NQI0 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
DDX4Q9NQI0 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
DDX4Q9NQI0 AC079089.2-201ENST00000531211 1277 ntBASIC25.78■■□□□ 1.72
DDX4Q9NQI0 SPI1-203ENST00000533030 661 ntTSL 2 BASIC25.78■■□□□ 1.72
DDX4Q9NQI0 AC104187.1-201ENST00000607510 612 ntBASIC25.78■■□□□ 1.72
DDX4Q9NQI0 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
DDX4Q9NQI0 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC25.78■■□□□ 1.72
DDX4Q9NQI0 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
DDX4Q9NQI0 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC25.77■■□□□ 1.72
DDX4Q9NQI0 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC25.77■■□□□ 1.72
DDX4Q9NQI0 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC25.77■■□□□ 1.72
DDX4Q9NQI0 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
DDX4Q9NQI0 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC25.77■■□□□ 1.72
DDX4Q9NQI0 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
DDX4Q9NQI0 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC25.77■■□□□ 1.72
DDX4Q9NQI0 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC25.77■■□□□ 1.72
DDX4Q9NQI0 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC25.77■■□□□ 1.72
DDX4Q9NQI0 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC25.77■■□□□ 1.72
DDX4Q9NQI0 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC25.76■■□□□ 1.71
DDX4Q9NQI0 CROCCP5-201ENST00000436658 830 ntBASIC25.76■■□□□ 1.71
DDX4Q9NQI0 AC026185.1-201ENST00000445748 174 ntBASIC25.76■■□□□ 1.71
DDX4Q9NQI0 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC25.76■■□□□ 1.71
DDX4Q9NQI0 AC055733.4-201ENST00000638462 1354 ntBASIC25.76■■□□□ 1.71
DDX4Q9NQI0 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC25.76■■□□□ 1.71
DDX4Q9NQI0 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC25.76■■□□□ 1.71
DDX4Q9NQI0 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
DDX4Q9NQI0 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
DDX4Q9NQI0 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
DDX4Q9NQI0 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
DDX4Q9NQI0 KRT87P-202ENST00000534226 1464 ntBASIC25.75■■□□□ 1.71
DDX4Q9NQI0 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC25.75■■□□□ 1.71
DDX4Q9NQI0 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC25.75■■□□□ 1.71
DDX4Q9NQI0 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
DDX4Q9NQI0 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC25.75■■□□□ 1.71
DDX4Q9NQI0 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
DDX4Q9NQI0 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC25.75■■□□□ 1.71
DDX4Q9NQI0 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
DDX4Q9NQI0 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
DDX4Q9NQI0 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
DDX4Q9NQI0 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
DDX4Q9NQI0 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
DDX4Q9NQI0 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
DDX4Q9NQI0 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC25.74■■□□□ 1.71
DDX4Q9NQI0 MAP2K4P1-201ENST00000438453 1195 ntBASIC25.74■■□□□ 1.71
DDX4Q9NQI0 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
DDX4Q9NQI0 PPP1R14BP3-201ENST00000509033 445 ntBASIC25.74■■□□□ 1.71
DDX4Q9NQI0 AC093323.1-202ENST00000635031 2045 ntBASIC25.74■■□□□ 1.71
DDX4Q9NQI0 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
DDX4Q9NQI0 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
DDX4Q9NQI0 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC25.74■■□□□ 1.71
DDX4Q9NQI0 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC25.73■■□□□ 1.71
DDX4Q9NQI0 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
DDX4Q9NQI0 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
DDX4Q9NQI0 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
DDX4Q9NQI0 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC25.73■■□□□ 1.71
DDX4Q9NQI0 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
DDX4Q9NQI0 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC25.73■■□□□ 1.71
DDX4Q9NQI0 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC25.73■■□□□ 1.71
DDX4Q9NQI0 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
DDX4Q9NQI0 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
DDX4Q9NQI0 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC25.72■■□□□ 1.71
DDX4Q9NQI0 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
DDX4Q9NQI0 MFSD11-216ENST00000590393 1141 ntBASIC25.72■■□□□ 1.71
DDX4Q9NQI0 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
DDX4Q9NQI0 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
DDX4Q9NQI0 LINC00526-201ENST00000581067 1875 ntBASIC25.72■■□□□ 1.71
DDX4Q9NQI0 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC25.72■■□□□ 1.71
DDX4Q9NQI0 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
DDX4Q9NQI0 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC25.72■■□□□ 1.71
DDX4Q9NQI0 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
DDX4Q9NQI0 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC25.71■■□□□ 1.71
DDX4Q9NQI0 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC25.71■■□□□ 1.71
DDX4Q9NQI0 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC25.71■■□□□ 1.71
DDX4Q9NQI0 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC25.71■■□□□ 1.71
DDX4Q9NQI0 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
DDX4Q9NQI0 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
DDX4Q9NQI0 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC25.7■■□□□ 1.71
DDX4Q9NQI0 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
DDX4Q9NQI0 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
DDX4Q9NQI0 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
DDX4Q9NQI0 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
DDX4Q9NQI0 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
DDX4Q9NQI0 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC25.7■■□□□ 1.7
DDX4Q9NQI0 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms