Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.48■□□□□ 0.71
KIAA1549Q9HCM3 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
KIAA1549Q9HCM3 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.48■□□□□ 0.71
KIAA1549Q9HCM3 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
KIAA1549Q9HCM3 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KIAA1549Q9HCM3 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KIAA1549Q9HCM3 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
KIAA1549Q9HCM3 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.47■□□□□ 0.71
KIAA1549Q9HCM3 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.47■□□□□ 0.71
KIAA1549Q9HCM3 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
KIAA1549Q9HCM3 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.47■□□□□ 0.71
KIAA1549Q9HCM3 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.47■□□□□ 0.71
KIAA1549Q9HCM3 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
KIAA1549Q9HCM3 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
KIAA1549Q9HCM3 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KIAA1549Q9HCM3 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.46■□□□□ 0.71
KIAA1549Q9HCM3 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
KIAA1549Q9HCM3 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KIAA1549Q9HCM3 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
KIAA1549Q9HCM3 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
KIAA1549Q9HCM3 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
KIAA1549Q9HCM3 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
KIAA1549Q9HCM3 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
KIAA1549Q9HCM3 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
KIAA1549Q9HCM3 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.46■□□□□ 0.71
KIAA1549Q9HCM3 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
KIAA1549Q9HCM3 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KIAA1549Q9HCM3 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
KIAA1549Q9HCM3 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
KIAA1549Q9HCM3 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
KIAA1549Q9HCM3 AC233723.2-201ENST00000623798 2106 ntBASIC19.45■□□□□ 0.7
KIAA1549Q9HCM3 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KIAA1549Q9HCM3 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.45■□□□□ 0.7
KIAA1549Q9HCM3 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
KIAA1549Q9HCM3 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.45■□□□□ 0.7
KIAA1549Q9HCM3 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KIAA1549Q9HCM3 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.45■□□□□ 0.7
KIAA1549Q9HCM3 SMUG1P1-201ENST00000590640 811 ntBASIC19.45■□□□□ 0.7
KIAA1549Q9HCM3 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
KIAA1549Q9HCM3 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KIAA1549Q9HCM3 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KIAA1549Q9HCM3 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
KIAA1549Q9HCM3 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.45■□□□□ 0.7
KIAA1549Q9HCM3 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KIAA1549Q9HCM3 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KIAA1549Q9HCM3 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.44■□□□□ 0.7
KIAA1549Q9HCM3 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KIAA1549Q9HCM3 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
KIAA1549Q9HCM3 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
KIAA1549Q9HCM3 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KIAA1549Q9HCM3 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.44■□□□□ 0.7
KIAA1549Q9HCM3 LINC00526-201ENST00000581067 1875 ntBASIC19.44■□□□□ 0.7
KIAA1549Q9HCM3 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
KIAA1549Q9HCM3 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.44■□□□□ 0.7
KIAA1549Q9HCM3 AL034346.1-201ENST00000568244 1277 ntBASIC19.44■□□□□ 0.7
KIAA1549Q9HCM3 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.44■□□□□ 0.7
KIAA1549Q9HCM3 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KIAA1549Q9HCM3 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.44■□□□□ 0.7
KIAA1549Q9HCM3 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
KIAA1549Q9HCM3 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
KIAA1549Q9HCM3 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
KIAA1549Q9HCM3 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KIAA1549Q9HCM3 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KIAA1549Q9HCM3 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KIAA1549Q9HCM3 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KIAA1549Q9HCM3 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KIAA1549Q9HCM3 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
KIAA1549Q9HCM3 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.43■□□□□ 0.7
KIAA1549Q9HCM3 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KIAA1549Q9HCM3 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.43■□□□□ 0.7
KIAA1549Q9HCM3 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
KIAA1549Q9HCM3 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.43■□□□□ 0.7
KIAA1549Q9HCM3 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.43■□□□□ 0.7
KIAA1549Q9HCM3 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.42■□□□□ 0.7
KIAA1549Q9HCM3 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
KIAA1549Q9HCM3 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
KIAA1549Q9HCM3 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KIAA1549Q9HCM3 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
KIAA1549Q9HCM3 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
KIAA1549Q9HCM3 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
KIAA1549Q9HCM3 AC010141.3-201ENST00000456659 717 ntBASIC19.42■□□□□ 0.7
KIAA1549Q9HCM3 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KIAA1549Q9HCM3 AC133561.1-201ENST00000568600 2415 ntBASIC19.42■□□□□ 0.7
KIAA1549Q9HCM3 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
KIAA1549Q9HCM3 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.42■□□□□ 0.7
KIAA1549Q9HCM3 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.42■□□□□ 0.7
KIAA1549Q9HCM3 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
KIAA1549Q9HCM3 ESRRAP2-201ENST00000418437 1549 ntBASIC19.41■□□□□ 0.7
KIAA1549Q9HCM3 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.41■□□□□ 0.7
KIAA1549Q9HCM3 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.41■□□□□ 0.7
KIAA1549Q9HCM3 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
KIAA1549Q9HCM3 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
KIAA1549Q9HCM3 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.41■□□□□ 0.7
KIAA1549Q9HCM3 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KIAA1549Q9HCM3 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.41■□□□□ 0.7
KIAA1549Q9HCM3 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
KIAA1549Q9HCM3 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KIAA1549Q9HCM3 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KIAA1549Q9HCM3 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KIAA1549Q9HCM3 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms