Protein–RNA interactions for Protein: Q9H7M6

ZSWIM4, Zinc finger SWIM domain-containing protein 4, humanhuman

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM4Q9H7M6 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
ZSWIM4Q9H7M6 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
ZSWIM4Q9H7M6 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
ZSWIM4Q9H7M6 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
ZSWIM4Q9H7M6 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC24.49■■□□□ 1.51
ZSWIM4Q9H7M6 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
ZSWIM4Q9H7M6 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
ZSWIM4Q9H7M6 RHOF-204ENST00000537265 699 ntTSL 2 BASIC24.49■■□□□ 1.51
ZSWIM4Q9H7M6 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
ZSWIM4Q9H7M6 USP45-205ENST00000472914 1617 ntTSL 5 BASIC24.49■■□□□ 1.51
ZSWIM4Q9H7M6 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC24.49■■□□□ 1.51
ZSWIM4Q9H7M6 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC24.49■■□□□ 1.51
ZSWIM4Q9H7M6 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC24.49■■□□□ 1.51
ZSWIM4Q9H7M6 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
ZSWIM4Q9H7M6 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
ZSWIM4Q9H7M6 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
ZSWIM4Q9H7M6 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
ZSWIM4Q9H7M6 IRS3P-201ENST00000223076 1006 ntBASIC24.48■■□□□ 1.51
ZSWIM4Q9H7M6 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
ZSWIM4Q9H7M6 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
ZSWIM4Q9H7M6 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
ZSWIM4Q9H7M6 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC24.48■■□□□ 1.51
ZSWIM4Q9H7M6 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC24.48■■□□□ 1.51
ZSWIM4Q9H7M6 LINC01960-201ENST00000563759 1884 ntBASIC24.48■■□□□ 1.51
ZSWIM4Q9H7M6 AC087239.1-201ENST00000622671 572 ntBASIC24.48■■□□□ 1.51
ZSWIM4Q9H7M6 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
ZSWIM4Q9H7M6 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
ZSWIM4Q9H7M6 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
ZSWIM4Q9H7M6 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
ZSWIM4Q9H7M6 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC24.47■■□□□ 1.51
ZSWIM4Q9H7M6 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC24.47■■□□□ 1.51
ZSWIM4Q9H7M6 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
ZSWIM4Q9H7M6 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC24.47■■□□□ 1.51
ZSWIM4Q9H7M6 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
ZSWIM4Q9H7M6 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
ZSWIM4Q9H7M6 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC24.46■■□□□ 1.51
ZSWIM4Q9H7M6 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
ZSWIM4Q9H7M6 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC24.46■■□□□ 1.51
ZSWIM4Q9H7M6 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
ZSWIM4Q9H7M6 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC24.46■■□□□ 1.51
ZSWIM4Q9H7M6 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
ZSWIM4Q9H7M6 AC010141.3-201ENST00000456659 717 ntBASIC24.46■■□□□ 1.51
ZSWIM4Q9H7M6 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC24.46■■□□□ 1.51
ZSWIM4Q9H7M6 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC24.46■■□□□ 1.51
ZSWIM4Q9H7M6 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
ZSWIM4Q9H7M6 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
ZSWIM4Q9H7M6 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
ZSWIM4Q9H7M6 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.51
ZSWIM4Q9H7M6 C1orf229-201ENST00000623686 2258 ntBASIC24.45■■□□□ 1.5
ZSWIM4Q9H7M6 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC24.45■■□□□ 1.5
ZSWIM4Q9H7M6 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
ZSWIM4Q9H7M6 EFS-203ENST00000429593 2610 ntTSL 2 BASIC24.45■■□□□ 1.5
ZSWIM4Q9H7M6 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
ZSWIM4Q9H7M6 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
ZSWIM4Q9H7M6 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
ZSWIM4Q9H7M6 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC24.45■■□□□ 1.5
ZSWIM4Q9H7M6 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
ZSWIM4Q9H7M6 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
ZSWIM4Q9H7M6 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
ZSWIM4Q9H7M6 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
ZSWIM4Q9H7M6 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
ZSWIM4Q9H7M6 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
ZSWIM4Q9H7M6 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
ZSWIM4Q9H7M6 MIR572-201ENST00000384983 95 ntBASIC24.44■■□□□ 1.5
ZSWIM4Q9H7M6 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
ZSWIM4Q9H7M6 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC24.44■■□□□ 1.5
ZSWIM4Q9H7M6 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC24.44■■□□□ 1.5
ZSWIM4Q9H7M6 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
ZSWIM4Q9H7M6 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC24.44■■□□□ 1.5
ZSWIM4Q9H7M6 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC24.44■■□□□ 1.5
ZSWIM4Q9H7M6 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
ZSWIM4Q9H7M6 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
ZSWIM4Q9H7M6 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
ZSWIM4Q9H7M6 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC24.44■■□□□ 1.5
ZSWIM4Q9H7M6 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ZSWIM4Q9H7M6 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC24.43■■□□□ 1.5
ZSWIM4Q9H7M6 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
ZSWIM4Q9H7M6 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ZSWIM4Q9H7M6 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ZSWIM4Q9H7M6 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC24.43■■□□□ 1.5
ZSWIM4Q9H7M6 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
ZSWIM4Q9H7M6 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC24.43■■□□□ 1.5
ZSWIM4Q9H7M6 LGR4-203ENST00000480977 492 ntTSL 2 BASIC24.43■■□□□ 1.5
ZSWIM4Q9H7M6 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
ZSWIM4Q9H7M6 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ZSWIM4Q9H7M6 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ZSWIM4Q9H7M6 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC24.43■■□□□ 1.5
ZSWIM4Q9H7M6 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
ZSWIM4Q9H7M6 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC24.42■■□□□ 1.5
ZSWIM4Q9H7M6 USP48-205ENST00000421625 2818 ntTSL 2 BASIC24.42■■□□□ 1.5
ZSWIM4Q9H7M6 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
ZSWIM4Q9H7M6 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
ZSWIM4Q9H7M6 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
ZSWIM4Q9H7M6 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
ZSWIM4Q9H7M6 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
ZSWIM4Q9H7M6 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
ZSWIM4Q9H7M6 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
ZSWIM4Q9H7M6 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
ZSWIM4Q9H7M6 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
ZSWIM4Q9H7M6 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC24.41■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms