Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CPNE2Q96FN4 CA15P2-201ENST00000611168 834 ntBASIC18.74■□□□□ 0.59
CPNE2Q96FN4 AC241377.3-202ENST00000626088 1088 ntBASIC18.74■□□□□ 0.59
CPNE2Q96FN4 AC241585.3-202ENST00000628937 1088 ntBASIC18.74■□□□□ 0.59
CPNE2Q96FN4 AC245100.8-202ENST00000629247 1058 ntBASIC18.74■□□□□ 0.59
CPNE2Q96FN4 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPNE2Q96FN4 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPNE2Q96FN4 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.74■□□□□ 0.59
CPNE2Q96FN4 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPNE2Q96FN4 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.73■□□□□ 0.59
CPNE2Q96FN4 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CPNE2Q96FN4 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPNE2Q96FN4 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPNE2Q96FN4 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPNE2Q96FN4 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CPNE2Q96FN4 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
CPNE2Q96FN4 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CPNE2Q96FN4 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.73■□□□□ 0.59
CPNE2Q96FN4 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
CPNE2Q96FN4 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CPNE2Q96FN4 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CPNE2Q96FN4 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CPNE2Q96FN4 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CPNE2Q96FN4 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
CPNE2Q96FN4 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CPNE2Q96FN4 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CPNE2Q96FN4 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CPNE2Q96FN4 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.72■□□□□ 0.59
CPNE2Q96FN4 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CPNE2Q96FN4 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CPNE2Q96FN4 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CPNE2Q96FN4 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CPNE2Q96FN4 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.72■□□□□ 0.59
CPNE2Q96FN4 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CPNE2Q96FN4 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CPNE2Q96FN4 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.72■□□□□ 0.59
CPNE2Q96FN4 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
CPNE2Q96FN4 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CPNE2Q96FN4 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CPNE2Q96FN4 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CPNE2Q96FN4 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.72■□□□□ 0.59
CPNE2Q96FN4 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPNE2Q96FN4 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPNE2Q96FN4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.71■□□□□ 0.59
CPNE2Q96FN4 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CPNE2Q96FN4 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.71■□□□□ 0.59
CPNE2Q96FN4 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CPNE2Q96FN4 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPNE2Q96FN4 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPNE2Q96FN4 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.71■□□□□ 0.59
CPNE2Q96FN4 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPNE2Q96FN4 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
CPNE2Q96FN4 AL117332.1-201ENST00000622628 974 ntBASIC18.71■□□□□ 0.59
CPNE2Q96FN4 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPNE2Q96FN4 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPNE2Q96FN4 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.71■□□□□ 0.59
CPNE2Q96FN4 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPNE2Q96FN4 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPNE2Q96FN4 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CPNE2Q96FN4 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
CPNE2Q96FN4 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.71■□□□□ 0.58
CPNE2Q96FN4 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
CPNE2Q96FN4 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.7■□□□□ 0.58
CPNE2Q96FN4 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE2Q96FN4 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.7■□□□□ 0.58
CPNE2Q96FN4 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE2Q96FN4 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE2Q96FN4 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.7■□□□□ 0.58
CPNE2Q96FN4 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE2Q96FN4 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE2Q96FN4 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.7■□□□□ 0.58
CPNE2Q96FN4 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE2Q96FN4 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE2Q96FN4 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE2Q96FN4 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE2Q96FN4 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE2Q96FN4 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE2Q96FN4 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE2Q96FN4 AL499627.2-201ENST00000606283 725 ntBASIC18.7■□□□□ 0.58
CPNE2Q96FN4 MIR6724-1-201ENST00000616420 92 ntBASIC18.7■□□□□ 0.58
CPNE2Q96FN4 MIR6724-2-201ENST00000616483 92 ntBASIC18.7■□□□□ 0.58
CPNE2Q96FN4 MIR6724-4-201ENST00000617390 92 ntBASIC18.7■□□□□ 0.58
CPNE2Q96FN4 MIR6724-3-201ENST00000622482 92 ntBASIC18.7■□□□□ 0.58
CPNE2Q96FN4 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.7■□□□□ 0.58
CPNE2Q96FN4 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.7■□□□□ 0.58
CPNE2Q96FN4 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE2Q96FN4 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.7■□□□□ 0.58
CPNE2Q96FN4 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CPNE2Q96FN4 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPNE2Q96FN4 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CPNE2Q96FN4 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPNE2Q96FN4 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPNE2Q96FN4 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPNE2Q96FN4 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPNE2Q96FN4 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CPNE2Q96FN4 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
CPNE2Q96FN4 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPNE2Q96FN4 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPNE2Q96FN4 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPNE2Q96FN4 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms