Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 AC012676.1-201ENST00000574705 1949 ntBASIC19.43■□□□□ 0.7
CPNE4Q96A23 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CPNE4Q96A23 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CPNE4Q96A23 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.43■□□□□ 0.7
CPNE4Q96A23 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.43■□□□□ 0.7
CPNE4Q96A23 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.43■□□□□ 0.7
CPNE4Q96A23 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.43■□□□□ 0.7
CPNE4Q96A23 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.43■□□□□ 0.7
CPNE4Q96A23 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CPNE4Q96A23 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CPNE4Q96A23 C1orf229-201ENST00000623686 2258 ntBASIC19.42■□□□□ 0.7
CPNE4Q96A23 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CPNE4Q96A23 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CPNE4Q96A23 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CPNE4Q96A23 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CPNE4Q96A23 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.42■□□□□ 0.7
CPNE4Q96A23 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CPNE4Q96A23 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.42■□□□□ 0.7
CPNE4Q96A23 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CPNE4Q96A23 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CPNE4Q96A23 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CPNE4Q96A23 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CPNE4Q96A23 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CPNE4Q96A23 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CPNE4Q96A23 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.42■□□□□ 0.7
CPNE4Q96A23 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.42■□□□□ 0.7
CPNE4Q96A23 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CPNE4Q96A23 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CPNE4Q96A23 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.41■□□□□ 0.7
CPNE4Q96A23 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CPNE4Q96A23 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CPNE4Q96A23 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CPNE4Q96A23 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CPNE4Q96A23 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.41■□□□□ 0.7
CPNE4Q96A23 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPNE4Q96A23 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPNE4Q96A23 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.41■□□□□ 0.7
CPNE4Q96A23 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPNE4Q96A23 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CPNE4Q96A23 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CPNE4Q96A23 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
CPNE4Q96A23 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPNE4Q96A23 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPNE4Q96A23 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CPNE4Q96A23 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPNE4Q96A23 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CPNE4Q96A23 AC027612.3-201ENST00000413684 1047 ntBASIC19.4■□□□□ 0.7
CPNE4Q96A23 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.4■□□□□ 0.7
CPNE4Q96A23 SMUG1P1-201ENST00000590640 811 ntBASIC19.4■□□□□ 0.7
CPNE4Q96A23 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.4■□□□□ 0.7
CPNE4Q96A23 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CPNE4Q96A23 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.4■□□□□ 0.7
CPNE4Q96A23 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.4■□□□□ 0.7
CPNE4Q96A23 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPNE4Q96A23 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CPNE4Q96A23 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPNE4Q96A23 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CPNE4Q96A23 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CPNE4Q96A23 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPNE4Q96A23 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.39■□□□□ 0.69
CPNE4Q96A23 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPNE4Q96A23 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPNE4Q96A23 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPNE4Q96A23 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CPNE4Q96A23 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.39■□□□□ 0.69
CPNE4Q96A23 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.39■□□□□ 0.69
CPNE4Q96A23 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPNE4Q96A23 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPNE4Q96A23 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPNE4Q96A23 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.39■□□□□ 0.69
CPNE4Q96A23 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPNE4Q96A23 AC137767.1-201ENST00000602918 1920 ntBASIC19.39■□□□□ 0.69
CPNE4Q96A23 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPNE4Q96A23 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPNE4Q96A23 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CPNE4Q96A23 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPNE4Q96A23 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPNE4Q96A23 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CPNE4Q96A23 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.38■□□□□ 0.69
CPNE4Q96A23 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPNE4Q96A23 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CPNE4Q96A23 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CPNE4Q96A23 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CPNE4Q96A23 AC127496.7-201ENST00000625110 1798 ntBASIC19.38■□□□□ 0.69
CPNE4Q96A23 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPNE4Q96A23 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CPNE4Q96A23 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.37■□□□□ 0.69
CPNE4Q96A23 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CPNE4Q96A23 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.37■□□□□ 0.69
CPNE4Q96A23 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.37■□□□□ 0.69
CPNE4Q96A23 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.37■□□□□ 0.69
CPNE4Q96A23 OR7E47P-201ENST00000546390 1422 ntBASIC19.37■□□□□ 0.69
CPNE4Q96A23 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPNE4Q96A23 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.37■□□□□ 0.69
CPNE4Q96A23 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.37■□□□□ 0.69
CPNE4Q96A23 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPNE4Q96A23 MIR935-201ENST00000401179 91 ntBASIC19.37■□□□□ 0.69
CPNE4Q96A23 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPNE4Q96A23 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.37■□□□□ 0.69
CPNE4Q96A23 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms