Protein–RNA interactions for Protein: Q8WVM8

SCFD1, Sec1 family domain-containing protein 1, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1Q8WVM8 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SCFD1Q8WVM8 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
SCFD1Q8WVM8 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.91■■□□□ 1.42
SCFD1Q8WVM8 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC23.91■■□□□ 1.42
SCFD1Q8WVM8 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SCFD1Q8WVM8 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
SCFD1Q8WVM8 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
SCFD1Q8WVM8 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SCFD1Q8WVM8 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SCFD1Q8WVM8 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SCFD1Q8WVM8 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
SCFD1Q8WVM8 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SCFD1Q8WVM8 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SCFD1Q8WVM8 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC23.9■■□□□ 1.42
SCFD1Q8WVM8 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC23.9■■□□□ 1.42
SCFD1Q8WVM8 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC23.9■■□□□ 1.42
SCFD1Q8WVM8 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
SCFD1Q8WVM8 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.9■■□□□ 1.42
SCFD1Q8WVM8 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
SCFD1Q8WVM8 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SCFD1Q8WVM8 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC23.9■■□□□ 1.42
SCFD1Q8WVM8 AC087239.1-201ENST00000622671 572 ntBASIC23.9■■□□□ 1.42
SCFD1Q8WVM8 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC23.9■■□□□ 1.42
SCFD1Q8WVM8 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SCFD1Q8WVM8 OXCT2P1-201ENST00000447263 1535 ntBASIC23.89■■□□□ 1.42
SCFD1Q8WVM8 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.42
SCFD1Q8WVM8 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.42
SCFD1Q8WVM8 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.42
SCFD1Q8WVM8 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
SCFD1Q8WVM8 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
SCFD1Q8WVM8 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.42
SCFD1Q8WVM8 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
SCFD1Q8WVM8 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
SCFD1Q8WVM8 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.42
SCFD1Q8WVM8 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SCFD1Q8WVM8 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
SCFD1Q8WVM8 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
SCFD1Q8WVM8 AL031432.3-201ENST00000607698 485 ntBASIC23.89■■□□□ 1.41
SCFD1Q8WVM8 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SCFD1Q8WVM8 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
SCFD1Q8WVM8 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
SCFD1Q8WVM8 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
SCFD1Q8WVM8 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC23.89■■□□□ 1.41
SCFD1Q8WVM8 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
SCFD1Q8WVM8 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SCFD1Q8WVM8 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SCFD1Q8WVM8 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
SCFD1Q8WVM8 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
SCFD1Q8WVM8 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC23.88■■□□□ 1.41
SCFD1Q8WVM8 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SCFD1Q8WVM8 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SCFD1Q8WVM8 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
SCFD1Q8WVM8 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC23.88■■□□□ 1.41
SCFD1Q8WVM8 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
SCFD1Q8WVM8 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
SCFD1Q8WVM8 AC133561.4-201ENST00000566112 224 ntBASIC23.88■■□□□ 1.41
SCFD1Q8WVM8 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC23.88■■□□□ 1.41
SCFD1Q8WVM8 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC23.88■■□□□ 1.41
SCFD1Q8WVM8 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC23.88■■□□□ 1.41
SCFD1Q8WVM8 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
SCFD1Q8WVM8 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
SCFD1Q8WVM8 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
SCFD1Q8WVM8 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SCFD1Q8WVM8 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC23.87■■□□□ 1.41
SCFD1Q8WVM8 AP001330.3-201ENST00000520123 633 ntBASIC23.87■■□□□ 1.41
SCFD1Q8WVM8 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.87■■□□□ 1.41
SCFD1Q8WVM8 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC23.87■■□□□ 1.41
SCFD1Q8WVM8 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
SCFD1Q8WVM8 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC23.87■■□□□ 1.41
SCFD1Q8WVM8 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
SCFD1Q8WVM8 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
SCFD1Q8WVM8 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
SCFD1Q8WVM8 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC23.86■■□□□ 1.41
SCFD1Q8WVM8 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
SCFD1Q8WVM8 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC23.86■■□□□ 1.41
SCFD1Q8WVM8 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
SCFD1Q8WVM8 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SCFD1Q8WVM8 EDA-201ENST00000338901 1233 ntBASIC23.86■■□□□ 1.41
SCFD1Q8WVM8 AC008764.7-201ENST00000593779 1081 ntBASIC23.86■■□□□ 1.41
SCFD1Q8WVM8 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SCFD1Q8WVM8 AL139246.5-201ENST00000606645 996 ntBASIC23.86■■□□□ 1.41
SCFD1Q8WVM8 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC23.86■■□□□ 1.41
SCFD1Q8WVM8 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
SCFD1Q8WVM8 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
SCFD1Q8WVM8 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SCFD1Q8WVM8 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SCFD1Q8WVM8 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SCFD1Q8WVM8 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC23.85■■□□□ 1.41
SCFD1Q8WVM8 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.85■■□□□ 1.41
SCFD1Q8WVM8 MAG-206ENST00000597035 542 ntTSL 4 BASIC23.85■■□□□ 1.41
SCFD1Q8WVM8 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
SCFD1Q8WVM8 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC23.85■■□□□ 1.41
SCFD1Q8WVM8 OR7E47P-201ENST00000546390 1422 ntBASIC23.84■■□□□ 1.41
SCFD1Q8WVM8 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC23.84■■□□□ 1.41
SCFD1Q8WVM8 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SCFD1Q8WVM8 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SCFD1Q8WVM8 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SCFD1Q8WVM8 AC099791.1-201ENST00000416440 715 ntBASIC23.84■■□□□ 1.41
SCFD1Q8WVM8 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC23.84■■□□□ 1.41
SCFD1Q8WVM8 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC23.84■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms