Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC22.57■■□□□ 1.2
SH3RF2Q8TEC5 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
SH3RF2Q8TEC5 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.57■■□□□ 1.2
SH3RF2Q8TEC5 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SH3RF2Q8TEC5 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC22.57■■□□□ 1.2
SH3RF2Q8TEC5 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC22.57■■□□□ 1.2
SH3RF2Q8TEC5 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SH3RF2Q8TEC5 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
SH3RF2Q8TEC5 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.57■■□□□ 1.2
SH3RF2Q8TEC5 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.57■■□□□ 1.2
SH3RF2Q8TEC5 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC22.57■■□□□ 1.2
SH3RF2Q8TEC5 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SH3RF2Q8TEC5 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SH3RF2Q8TEC5 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SH3RF2Q8TEC5 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC22.56■■□□□ 1.2
SH3RF2Q8TEC5 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
SH3RF2Q8TEC5 AP004607.4-201ENST00000530158 1459 ntBASIC22.56■■□□□ 1.2
SH3RF2Q8TEC5 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
SH3RF2Q8TEC5 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC22.56■■□□□ 1.2
SH3RF2Q8TEC5 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC22.56■■□□□ 1.2
SH3RF2Q8TEC5 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
SH3RF2Q8TEC5 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SH3RF2Q8TEC5 AC004854.2-201ENST00000608450 1441 ntBASIC22.56■■□□□ 1.2
SH3RF2Q8TEC5 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.56■■□□□ 1.2
SH3RF2Q8TEC5 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SH3RF2Q8TEC5 ASL-203ENST00000380839 1765 ntTSL 5 BASIC22.55■■□□□ 1.2
SH3RF2Q8TEC5 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SH3RF2Q8TEC5 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SH3RF2Q8TEC5 DUSP8P5-201ENST00000422884 1815 ntBASIC22.55■■□□□ 1.2
SH3RF2Q8TEC5 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
SH3RF2Q8TEC5 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC22.55■■□□□ 1.2
SH3RF2Q8TEC5 VPS53-216ENST00000574029 585 ntTSL 4 BASIC22.55■■□□□ 1.2
SH3RF2Q8TEC5 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SH3RF2Q8TEC5 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SH3RF2Q8TEC5 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.55■■□□□ 1.2
SH3RF2Q8TEC5 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
SH3RF2Q8TEC5 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SH3RF2Q8TEC5 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SH3RF2Q8TEC5 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
SH3RF2Q8TEC5 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SH3RF2Q8TEC5 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
SH3RF2Q8TEC5 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.54■■□□□ 1.2
SH3RF2Q8TEC5 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
SH3RF2Q8TEC5 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC22.54■■□□□ 1.2
SH3RF2Q8TEC5 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC22.54■■□□□ 1.2
SH3RF2Q8TEC5 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC22.54■■□□□ 1.2
SH3RF2Q8TEC5 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC22.54■■□□□ 1.2
SH3RF2Q8TEC5 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
SH3RF2Q8TEC5 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SH3RF2Q8TEC5 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SH3RF2Q8TEC5 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC22.54■■□□□ 1.2
SH3RF2Q8TEC5 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SH3RF2Q8TEC5 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SH3RF2Q8TEC5 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SH3RF2Q8TEC5 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SH3RF2Q8TEC5 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SH3RF2Q8TEC5 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SH3RF2Q8TEC5 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
SH3RF2Q8TEC5 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC22.53■■□□□ 1.2
SH3RF2Q8TEC5 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC22.53■■□□□ 1.2
SH3RF2Q8TEC5 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SH3RF2Q8TEC5 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SH3RF2Q8TEC5 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
SH3RF2Q8TEC5 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SH3RF2Q8TEC5 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
SH3RF2Q8TEC5 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
SH3RF2Q8TEC5 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC22.52■■□□□ 1.2
SH3RF2Q8TEC5 AC137761.2-201ENST00000561729 223 ntBASIC22.52■■□□□ 1.2
SH3RF2Q8TEC5 AC145350.3-201ENST00000569033 163 ntBASIC22.52■■□□□ 1.2
SH3RF2Q8TEC5 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SH3RF2Q8TEC5 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
SH3RF2Q8TEC5 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SH3RF2Q8TEC5 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SH3RF2Q8TEC5 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SH3RF2Q8TEC5 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
SH3RF2Q8TEC5 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC22.51■■□□□ 1.19
SH3RF2Q8TEC5 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC22.51■■□□□ 1.19
SH3RF2Q8TEC5 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
SH3RF2Q8TEC5 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC22.51■■□□□ 1.19
SH3RF2Q8TEC5 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SH3RF2Q8TEC5 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SH3RF2Q8TEC5 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
SH3RF2Q8TEC5 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.51■■□□□ 1.19
SH3RF2Q8TEC5 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC22.51■■□□□ 1.19
SH3RF2Q8TEC5 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SH3RF2Q8TEC5 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.5■■□□□ 1.19
SH3RF2Q8TEC5 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC22.5■■□□□ 1.19
SH3RF2Q8TEC5 STX7-201ENST00000367937 1090 ntTSL 5 BASIC22.5■■□□□ 1.19
SH3RF2Q8TEC5 AC016769.1-201ENST00000409132 1010 ntBASIC22.5■■□□□ 1.19
SH3RF2Q8TEC5 AC006015.1-201ENST00000429970 570 ntBASIC22.5■■□□□ 1.19
SH3RF2Q8TEC5 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC22.5■■□□□ 1.19
SH3RF2Q8TEC5 DBI-210ENST00000542275 757 ntTSL 5 BASIC22.5■■□□□ 1.19
SH3RF2Q8TEC5 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SH3RF2Q8TEC5 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC22.5■■□□□ 1.19
SH3RF2Q8TEC5 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.5■■□□□ 1.19
SH3RF2Q8TEC5 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SH3RF2Q8TEC5 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SH3RF2Q8TEC5 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SH3RF2Q8TEC5 AC068473.5-201ENST00000616428 2072 ntBASIC22.5■■□□□ 1.19
SH3RF2Q8TEC5 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms