Protein–RNA interactions for Protein: Q8NEZ2

VPS37A, Vacuolar protein sorting-associated protein 37A, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37AQ8NEZ2 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VPS37AQ8NEZ2 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
VPS37AQ8NEZ2 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VPS37AQ8NEZ2 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
VPS37AQ8NEZ2 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VPS37AQ8NEZ2 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.62■□□□□ 0.89
VPS37AQ8NEZ2 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.61■□□□□ 0.89
VPS37AQ8NEZ2 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
VPS37AQ8NEZ2 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
VPS37AQ8NEZ2 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
VPS37AQ8NEZ2 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.61■□□□□ 0.89
VPS37AQ8NEZ2 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
VPS37AQ8NEZ2 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VPS37AQ8NEZ2 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
VPS37AQ8NEZ2 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
VPS37AQ8NEZ2 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VPS37AQ8NEZ2 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
VPS37AQ8NEZ2 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VPS37AQ8NEZ2 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
VPS37AQ8NEZ2 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
VPS37AQ8NEZ2 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VPS37AQ8NEZ2 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
VPS37AQ8NEZ2 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VPS37AQ8NEZ2 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
VPS37AQ8NEZ2 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VPS37AQ8NEZ2 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.6■□□□□ 0.89
VPS37AQ8NEZ2 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.6■□□□□ 0.89
VPS37AQ8NEZ2 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.6■□□□□ 0.89
VPS37AQ8NEZ2 AL356740.2-201ENST00000601559 647 ntBASIC20.6■□□□□ 0.89
VPS37AQ8NEZ2 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
VPS37AQ8NEZ2 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
VPS37AQ8NEZ2 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
VPS37AQ8NEZ2 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VPS37AQ8NEZ2 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
VPS37AQ8NEZ2 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
VPS37AQ8NEZ2 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.59■□□□□ 0.89
VPS37AQ8NEZ2 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.59■□□□□ 0.89
VPS37AQ8NEZ2 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.59■□□□□ 0.89
VPS37AQ8NEZ2 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VPS37AQ8NEZ2 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VPS37AQ8NEZ2 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.89
VPS37AQ8NEZ2 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
VPS37AQ8NEZ2 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
VPS37AQ8NEZ2 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
VPS37AQ8NEZ2 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
VPS37AQ8NEZ2 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.58■□□□□ 0.89
VPS37AQ8NEZ2 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
VPS37AQ8NEZ2 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
VPS37AQ8NEZ2 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
VPS37AQ8NEZ2 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
VPS37AQ8NEZ2 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
VPS37AQ8NEZ2 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
VPS37AQ8NEZ2 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.58■□□□□ 0.88
VPS37AQ8NEZ2 AC133637.1-201ENST00000624115 1537 ntBASIC20.58■□□□□ 0.88
VPS37AQ8NEZ2 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
VPS37AQ8NEZ2 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VPS37AQ8NEZ2 AC007375.3-201ENST00000600936 2314 ntBASIC20.57■□□□□ 0.88
VPS37AQ8NEZ2 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
VPS37AQ8NEZ2 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.57■□□□□ 0.88
VPS37AQ8NEZ2 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VPS37AQ8NEZ2 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.57■□□□□ 0.88
VPS37AQ8NEZ2 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VPS37AQ8NEZ2 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.57■□□□□ 0.88
VPS37AQ8NEZ2 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.56■□□□□ 0.88
VPS37AQ8NEZ2 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.56■□□□□ 0.88
VPS37AQ8NEZ2 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.56■□□□□ 0.88
VPS37AQ8NEZ2 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VPS37AQ8NEZ2 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.56■□□□□ 0.88
VPS37AQ8NEZ2 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.56■□□□□ 0.88
VPS37AQ8NEZ2 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
VPS37AQ8NEZ2 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
VPS37AQ8NEZ2 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VPS37AQ8NEZ2 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
VPS37AQ8NEZ2 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
VPS37AQ8NEZ2 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VPS37AQ8NEZ2 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.55■□□□□ 0.88
VPS37AQ8NEZ2 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VPS37AQ8NEZ2 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VPS37AQ8NEZ2 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
VPS37AQ8NEZ2 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.55■□□□□ 0.88
VPS37AQ8NEZ2 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.55■□□□□ 0.88
VPS37AQ8NEZ2 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.55■□□□□ 0.88
VPS37AQ8NEZ2 AC092171.4-201ENST00000609130 632 ntBASIC20.55■□□□□ 0.88
VPS37AQ8NEZ2 pRNA.6-201ENST00000610482 90 ntBASIC20.55■□□□□ 0.88
VPS37AQ8NEZ2 pRNA.5-201ENST00000612139 90 ntBASIC20.55■□□□□ 0.88
VPS37AQ8NEZ2 pRNA.11-201ENST00000618423 90 ntBASIC20.55■□□□□ 0.88
VPS37AQ8NEZ2 pRNA.13-201ENST00000619112 90 ntBASIC20.55■□□□□ 0.88
VPS37AQ8NEZ2 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VPS37AQ8NEZ2 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VPS37AQ8NEZ2 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
VPS37AQ8NEZ2 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VPS37AQ8NEZ2 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
VPS37AQ8NEZ2 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
VPS37AQ8NEZ2 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VPS37AQ8NEZ2 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VPS37AQ8NEZ2 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
VPS37AQ8NEZ2 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
VPS37AQ8NEZ2 AL035685.1-201ENST00000636663 812 ntBASIC20.54■□□□□ 0.88
VPS37AQ8NEZ2 AC068587.7-201ENST00000641602 218 ntBASIC20.54■□□□□ 0.88
VPS37AQ8NEZ2 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms