Protein–RNA interactions for Protein: Q8NCS7

SLC44A5, Choline transporter-like protein 5, humanhuman

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A5Q8NCS7 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
SLC44A5Q8NCS7 C9orf163-202ENST00000624034 2573 ntBASIC25.63■■□□□ 1.69
SLC44A5Q8NCS7 ME3-201ENST00000323418 1068 ntTSL 5 BASIC25.63■■□□□ 1.69
SLC44A5Q8NCS7 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC25.63■■□□□ 1.69
SLC44A5Q8NCS7 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SLC44A5Q8NCS7 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC25.63■■□□□ 1.69
SLC44A5Q8NCS7 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC25.63■■□□□ 1.69
SLC44A5Q8NCS7 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC25.63■■□□□ 1.69
SLC44A5Q8NCS7 AP004607.4-201ENST00000530158 1459 ntBASIC25.63■■□□□ 1.69
SLC44A5Q8NCS7 GCA-201ENST00000233612 1694 ntTSL 2 BASIC25.63■■□□□ 1.69
SLC44A5Q8NCS7 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC25.63■■□□□ 1.69
SLC44A5Q8NCS7 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC25.63■■□□□ 1.69
SLC44A5Q8NCS7 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
SLC44A5Q8NCS7 AC087742.1-201ENST00000575880 1738 ntBASIC25.63■■□□□ 1.69
SLC44A5Q8NCS7 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
SLC44A5Q8NCS7 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC25.63■■□□□ 1.69
SLC44A5Q8NCS7 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SLC44A5Q8NCS7 COX20-201ENST00000366528 568 ntTSL 2 BASIC25.62■■□□□ 1.69
SLC44A5Q8NCS7 AC004911.1-201ENST00000416316 871 ntBASIC25.62■■□□□ 1.69
SLC44A5Q8NCS7 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC25.62■■□□□ 1.69
SLC44A5Q8NCS7 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC25.62■■□□□ 1.69
SLC44A5Q8NCS7 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SLC44A5Q8NCS7 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SLC44A5Q8NCS7 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
SLC44A5Q8NCS7 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SLC44A5Q8NCS7 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC25.62■■□□□ 1.69
SLC44A5Q8NCS7 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SLC44A5Q8NCS7 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC25.61■■□□□ 1.69
SLC44A5Q8NCS7 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC25.61■■□□□ 1.69
SLC44A5Q8NCS7 AC079089.2-201ENST00000531211 1277 ntBASIC25.61■■□□□ 1.69
SLC44A5Q8NCS7 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SLC44A5Q8NCS7 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC25.61■■□□□ 1.69
SLC44A5Q8NCS7 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC25.61■■□□□ 1.69
SLC44A5Q8NCS7 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
SLC44A5Q8NCS7 DUSP8P5-201ENST00000422884 1815 ntBASIC25.6■■□□□ 1.69
SLC44A5Q8NCS7 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SLC44A5Q8NCS7 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC25.6■■□□□ 1.69
SLC44A5Q8NCS7 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC25.6■■□□□ 1.69
SLC44A5Q8NCS7 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC25.6■■□□□ 1.69
SLC44A5Q8NCS7 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC25.6■■□□□ 1.69
SLC44A5Q8NCS7 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC25.6■■□□□ 1.69
SLC44A5Q8NCS7 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SLC44A5Q8NCS7 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC25.59■■□□□ 1.69
SLC44A5Q8NCS7 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SLC44A5Q8NCS7 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
SLC44A5Q8NCS7 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC25.59■■□□□ 1.69
SLC44A5Q8NCS7 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC25.59■■□□□ 1.69
SLC44A5Q8NCS7 GALNS-213ENST00000569433 723 ntTSL 3 BASIC25.59■■□□□ 1.69
SLC44A5Q8NCS7 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC25.59■■□□□ 1.69
SLC44A5Q8NCS7 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC25.59■■□□□ 1.69
SLC44A5Q8NCS7 LINC00526-201ENST00000581067 1875 ntBASIC25.59■■□□□ 1.69
SLC44A5Q8NCS7 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SLC44A5Q8NCS7 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
SLC44A5Q8NCS7 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
SLC44A5Q8NCS7 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
SLC44A5Q8NCS7 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC25.58■■□□□ 1.69
SLC44A5Q8NCS7 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC25.58■■□□□ 1.69
SLC44A5Q8NCS7 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
SLC44A5Q8NCS7 AC005224.4-201ENST00000583262 1652 ntBASIC25.58■■□□□ 1.68
SLC44A5Q8NCS7 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC25.57■■□□□ 1.68
SLC44A5Q8NCS7 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
SLC44A5Q8NCS7 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC25.57■■□□□ 1.68
SLC44A5Q8NCS7 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SLC44A5Q8NCS7 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC25.57■■□□□ 1.68
SLC44A5Q8NCS7 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC25.57■■□□□ 1.68
SLC44A5Q8NCS7 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
SLC44A5Q8NCS7 RARRES2P11-201ENST00000635158 484 ntBASIC25.57■■□□□ 1.68
SLC44A5Q8NCS7 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
SLC44A5Q8NCS7 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC25.57■■□□□ 1.68
SLC44A5Q8NCS7 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC25.57■■□□□ 1.68
SLC44A5Q8NCS7 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC25.57■■□□□ 1.68
SLC44A5Q8NCS7 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
SLC44A5Q8NCS7 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SLC44A5Q8NCS7 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SLC44A5Q8NCS7 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
SLC44A5Q8NCS7 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SLC44A5Q8NCS7 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SLC44A5Q8NCS7 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC25.56■■□□□ 1.68
SLC44A5Q8NCS7 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SLC44A5Q8NCS7 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SLC44A5Q8NCS7 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SLC44A5Q8NCS7 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC25.56■■□□□ 1.68
SLC44A5Q8NCS7 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC25.56■■□□□ 1.68
SLC44A5Q8NCS7 DLX3-202ENST00000512495 834 ntTSL 2 BASIC25.56■■□□□ 1.68
SLC44A5Q8NCS7 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SLC44A5Q8NCS7 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC25.56■■□□□ 1.68
SLC44A5Q8NCS7 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC25.56■■□□□ 1.68
SLC44A5Q8NCS7 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC25.56■■□□□ 1.68
SLC44A5Q8NCS7 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC25.56■■□□□ 1.68
SLC44A5Q8NCS7 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SLC44A5Q8NCS7 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
SLC44A5Q8NCS7 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SLC44A5Q8NCS7 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC25.55■■□□□ 1.68
SLC44A5Q8NCS7 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC25.55■■□□□ 1.68
SLC44A5Q8NCS7 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
SLC44A5Q8NCS7 AC090192.1-201ENST00000517740 490 ntBASIC25.55■■□□□ 1.68
SLC44A5Q8NCS7 CPT2-209ENST00000636935 803 ntTSL 5 BASIC25.55■■□□□ 1.68
SLC44A5Q8NCS7 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SLC44A5Q8NCS7 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
SLC44A5Q8NCS7 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms