Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SIX5Q8N196 AC005224.4-201ENST00000583262 1652 ntBASIC22.27■■□□□ 1.16
SIX5Q8N196 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SIX5Q8N196 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
SIX5Q8N196 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC22.27■■□□□ 1.16
SIX5Q8N196 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC22.27■■□□□ 1.16
SIX5Q8N196 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SIX5Q8N196 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC22.27■■□□□ 1.16
SIX5Q8N196 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
SIX5Q8N196 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
SIX5Q8N196 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC22.27■■□□□ 1.16
SIX5Q8N196 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
SIX5Q8N196 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SIX5Q8N196 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC22.26■■□□□ 1.15
SIX5Q8N196 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SIX5Q8N196 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SIX5Q8N196 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SIX5Q8N196 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SIX5Q8N196 RNA5SP413-201ENST00000516373 109 ntBASIC22.26■■□□□ 1.15
SIX5Q8N196 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SIX5Q8N196 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
SIX5Q8N196 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SIX5Q8N196 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SIX5Q8N196 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
SIX5Q8N196 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SIX5Q8N196 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
SIX5Q8N196 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SIX5Q8N196 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC22.25■■□□□ 1.15
SIX5Q8N196 AC133552.2-202ENST00000575694 574 ntBASIC22.25■■□□□ 1.15
SIX5Q8N196 AP001160.3-201ENST00000601484 763 ntBASIC22.25■■□□□ 1.15
SIX5Q8N196 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SIX5Q8N196 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
SIX5Q8N196 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
SIX5Q8N196 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SIX5Q8N196 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SIX5Q8N196 AC022211.4-201ENST00000625094 2161 ntBASIC22.24■■□□□ 1.15
SIX5Q8N196 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC22.24■■□□□ 1.15
SIX5Q8N196 CNN2P6-201ENST00000439038 900 ntBASIC22.24■■□□□ 1.15
SIX5Q8N196 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SIX5Q8N196 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SIX5Q8N196 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
SIX5Q8N196 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC22.24■■□□□ 1.15
SIX5Q8N196 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC22.24■■□□□ 1.15
SIX5Q8N196 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SIX5Q8N196 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.24■■□□□ 1.15
SIX5Q8N196 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SIX5Q8N196 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC22.24■■□□□ 1.15
SIX5Q8N196 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
SIX5Q8N196 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SIX5Q8N196 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SIX5Q8N196 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SIX5Q8N196 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
SIX5Q8N196 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
SIX5Q8N196 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC22.23■■□□□ 1.15
SIX5Q8N196 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC22.23■■□□□ 1.15
SIX5Q8N196 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC22.23■■□□□ 1.15
SIX5Q8N196 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
SIX5Q8N196 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC22.23■■□□□ 1.15
SIX5Q8N196 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC22.23■■□□□ 1.15
SIX5Q8N196 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
SIX5Q8N196 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
SIX5Q8N196 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC22.22■■□□□ 1.15
SIX5Q8N196 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
SIX5Q8N196 PRORSD1P-201ENST00000295112 541 ntBASIC22.22■■□□□ 1.15
SIX5Q8N196 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
SIX5Q8N196 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SIX5Q8N196 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC22.22■■□□□ 1.15
SIX5Q8N196 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SIX5Q8N196 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SIX5Q8N196 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
SIX5Q8N196 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SIX5Q8N196 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SIX5Q8N196 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC22.22■■□□□ 1.15
SIX5Q8N196 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC22.22■■□□□ 1.15
SIX5Q8N196 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SIX5Q8N196 AC009237.3-201ENST00000393279 1427 ntBASIC22.22■■□□□ 1.15
SIX5Q8N196 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SIX5Q8N196 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC22.21■■□□□ 1.15
SIX5Q8N196 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SIX5Q8N196 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC22.21■■□□□ 1.15
SIX5Q8N196 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SIX5Q8N196 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SIX5Q8N196 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC22.21■■□□□ 1.15
SIX5Q8N196 MIR4758-201ENST00000577688 71 ntBASIC22.21■■□□□ 1.15
SIX5Q8N196 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
SIX5Q8N196 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SIX5Q8N196 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC22.2■■□□□ 1.15
SIX5Q8N196 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SIX5Q8N196 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
SIX5Q8N196 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC22.2■■□□□ 1.14
SIX5Q8N196 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SIX5Q8N196 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC22.2■■□□□ 1.14
SIX5Q8N196 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC22.2■■□□□ 1.14
SIX5Q8N196 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
SIX5Q8N196 USP45-205ENST00000472914 1617 ntTSL 5 BASIC22.2■■□□□ 1.14
SIX5Q8N196 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SIX5Q8N196 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SIX5Q8N196 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SIX5Q8N196 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
SIX5Q8N196 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms