Protein–RNA interactions for Protein: Q86UF4

CCDC190, Coiled-coil domain-containing protein 190, humanhuman

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC190Q86UF4 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
CCDC190Q86UF4 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC190Q86UF4 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC190Q86UF4 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC190Q86UF4 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC190Q86UF4 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
CCDC190Q86UF4 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC190Q86UF4 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC190Q86UF4 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC190Q86UF4 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC190Q86UF4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC190Q86UF4 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC190Q86UF4 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC190Q86UF4 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
CCDC190Q86UF4 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC18.9■□□□□ 0.62
CCDC190Q86UF4 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CCDC190Q86UF4 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC18.9■□□□□ 0.62
CCDC190Q86UF4 GFER-205ENST00000569451 517 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC190Q86UF4 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC190Q86UF4 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC190Q86UF4 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC190Q86UF4 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC190Q86UF4 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CCDC190Q86UF4 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.89■□□□□ 0.62
CCDC190Q86UF4 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC190Q86UF4 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.89■□□□□ 0.61
CCDC190Q86UF4 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC190Q86UF4 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC190Q86UF4 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC190Q86UF4 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC18.89■□□□□ 0.61
CCDC190Q86UF4 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC190Q86UF4 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.89■□□□□ 0.61
CCDC190Q86UF4 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC190Q86UF4 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC190Q86UF4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC190Q86UF4 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC190Q86UF4 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC190Q86UF4 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CCDC190Q86UF4 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC190Q86UF4 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC190Q86UF4 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC190Q86UF4 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC190Q86UF4 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
CCDC190Q86UF4 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC190Q86UF4 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC190Q86UF4 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC190Q86UF4 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC190Q86UF4 CR559946.2-201ENST00000623684 991 ntBASIC18.88■□□□□ 0.61
CCDC190Q86UF4 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CCDC190Q86UF4 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC190Q86UF4 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC190Q86UF4 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC190Q86UF4 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC190Q86UF4 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC190Q86UF4 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC190Q86UF4 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC190Q86UF4 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC18.87■□□□□ 0.61
CCDC190Q86UF4 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC190Q86UF4 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC190Q86UF4 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.87■□□□□ 0.61
CCDC190Q86UF4 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC190Q86UF4 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC190Q86UF4 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC190Q86UF4 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC190Q86UF4 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.87■□□□□ 0.61
CCDC190Q86UF4 AC007029.1-201ENST00000604183 313 ntBASIC18.87■□□□□ 0.61
CCDC190Q86UF4 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC190Q86UF4 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC190Q86UF4 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC190Q86UF4 AL020996.1-203ENST00000536896 2307 ntBASIC18.86■□□□□ 0.61
CCDC190Q86UF4 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC190Q86UF4 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.86■□□□□ 0.61
CCDC190Q86UF4 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC190Q86UF4 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC190Q86UF4 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC190Q86UF4 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC190Q86UF4 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC190Q86UF4 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC190Q86UF4 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC190Q86UF4 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC190Q86UF4 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC190Q86UF4 GABARAPL3-202ENST00000624044 1851 ntBASIC18.86■□□□□ 0.61
CCDC190Q86UF4 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC190Q86UF4 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC190Q86UF4 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC190Q86UF4 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC190Q86UF4 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC190Q86UF4 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC190Q86UF4 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC190Q86UF4 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CCDC190Q86UF4 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC190Q86UF4 RPS2P7-201ENST00000447334 885 ntBASIC18.85■□□□□ 0.61
CCDC190Q86UF4 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC190Q86UF4 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CCDC190Q86UF4 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC190Q86UF4 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC190Q86UF4 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC190Q86UF4 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC190Q86UF4 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CCDC190Q86UF4 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms