Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
KRT40Q6A162 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
KRT40Q6A162 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
KRT40Q6A162 RBM38-205ENST00000440234 686 ntTSL 2 BASIC25.16■■□□□ 1.62
KRT40Q6A162 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC25.16■■□□□ 1.62
KRT40Q6A162 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
KRT40Q6A162 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC25.16■■□□□ 1.62
KRT40Q6A162 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
KRT40Q6A162 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC25.16■■□□□ 1.62
KRT40Q6A162 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
KRT40Q6A162 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
KRT40Q6A162 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
KRT40Q6A162 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
KRT40Q6A162 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
KRT40Q6A162 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC25.15■■□□□ 1.62
KRT40Q6A162 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC25.15■■□□□ 1.62
KRT40Q6A162 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
KRT40Q6A162 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
KRT40Q6A162 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC25.15■■□□□ 1.62
KRT40Q6A162 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
KRT40Q6A162 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC25.15■■□□□ 1.62
KRT40Q6A162 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
KRT40Q6A162 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
KRT40Q6A162 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
KRT40Q6A162 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
KRT40Q6A162 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.62
KRT40Q6A162 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
KRT40Q6A162 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC25.14■■□□□ 1.62
KRT40Q6A162 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
KRT40Q6A162 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC25.13■■□□□ 1.61
KRT40Q6A162 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC25.13■■□□□ 1.61
KRT40Q6A162 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
KRT40Q6A162 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
KRT40Q6A162 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
KRT40Q6A162 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
KRT40Q6A162 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
KRT40Q6A162 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
KRT40Q6A162 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
KRT40Q6A162 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC25.13■■□□□ 1.61
KRT40Q6A162 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
KRT40Q6A162 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC25.12■■□□□ 1.61
KRT40Q6A162 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
KRT40Q6A162 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC25.12■■□□□ 1.61
KRT40Q6A162 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC25.12■■□□□ 1.61
KRT40Q6A162 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
KRT40Q6A162 MIR939-201ENST00000401314 82 ntBASIC25.12■■□□□ 1.61
KRT40Q6A162 PLD4-205ENST00000553861 667 ntTSL 2 BASIC25.12■■□□□ 1.61
KRT40Q6A162 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
KRT40Q6A162 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
KRT40Q6A162 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC25.12■■□□□ 1.61
KRT40Q6A162 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
KRT40Q6A162 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
KRT40Q6A162 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
KRT40Q6A162 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
KRT40Q6A162 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
KRT40Q6A162 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
KRT40Q6A162 PTMA-205ENST00000410064 814 ntTSL 2 BASIC25.11■■□□□ 1.61
KRT40Q6A162 SLC47A1P1-202ENST00000449666 945 ntBASIC25.11■■□□□ 1.61
KRT40Q6A162 AP001330.3-201ENST00000520123 633 ntBASIC25.11■■□□□ 1.61
KRT40Q6A162 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
KRT40Q6A162 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
KRT40Q6A162 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
KRT40Q6A162 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
KRT40Q6A162 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
KRT40Q6A162 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
KRT40Q6A162 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
KRT40Q6A162 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
KRT40Q6A162 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
KRT40Q6A162 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
KRT40Q6A162 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
KRT40Q6A162 C11orf96-202ENST00000528572 1834 ntBASIC25.1■■□□□ 1.61
KRT40Q6A162 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
KRT40Q6A162 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
KRT40Q6A162 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC25.1■■□□□ 1.61
KRT40Q6A162 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
KRT40Q6A162 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC25.1■■□□□ 1.61
KRT40Q6A162 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC25.1■■□□□ 1.61
KRT40Q6A162 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
KRT40Q6A162 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
KRT40Q6A162 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
KRT40Q6A162 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
KRT40Q6A162 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
KRT40Q6A162 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC25.09■■□□□ 1.61
KRT40Q6A162 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
KRT40Q6A162 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
KRT40Q6A162 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
KRT40Q6A162 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
KRT40Q6A162 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
KRT40Q6A162 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
KRT40Q6A162 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
KRT40Q6A162 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
KRT40Q6A162 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
KRT40Q6A162 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
KRT40Q6A162 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
KRT40Q6A162 SNX3-202ENST00000349379 890 ntTSL 2 BASIC25.08■■□□□ 1.61
KRT40Q6A162 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
KRT40Q6A162 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC25.08■■□□□ 1.61
KRT40Q6A162 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC25.08■■□□□ 1.61
KRT40Q6A162 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC25.08■■□□□ 1.61
KRT40Q6A162 AC068587.7-201ENST00000641602 218 ntBASIC25.08■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms