Protein–RNA interactions for Protein: Q56UQ5

TPT1-like protein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q56UQ5 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC17.13■□□□□ 0.33
Q56UQ5 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Q56UQ5 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Q56UQ5 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q56UQ5 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC17.13■□□□□ 0.33
Q56UQ5 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q56UQ5 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q56UQ5 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Q56UQ5 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC17.12■□□□□ 0.33
Q56UQ5 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC17.12■□□□□ 0.33
Q56UQ5 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q56UQ5 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q56UQ5 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q56UQ5 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Q56UQ5 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q56UQ5 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC17.12■□□□□ 0.33
Q56UQ5 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC17.12■□□□□ 0.33
Q56UQ5 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Q56UQ5 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Q56UQ5 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.12■□□□□ 0.33
Q56UQ5 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q56UQ5 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q56UQ5 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Q56UQ5 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q56UQ5 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.12■□□□□ 0.33
Q56UQ5 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q56UQ5 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC17.11■□□□□ 0.33
Q56UQ5 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q56UQ5 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Q56UQ5 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q56UQ5 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q56UQ5 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.11■□□□□ 0.33
Q56UQ5 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q56UQ5 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q56UQ5 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q56UQ5 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Q56UQ5 MIR3621-201ENST00000580529 85 ntBASIC17.11■□□□□ 0.33
Q56UQ5 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.11■□□□□ 0.33
Q56UQ5 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q56UQ5 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Q56UQ5 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q56UQ5 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Q56UQ5 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Q56UQ5 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Q56UQ5 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q56UQ5 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC17.11■□□□□ 0.33
Q56UQ5 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Q56UQ5 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Q56UQ5 AC007375.3-201ENST00000600936 2314 ntBASIC17.1■□□□□ 0.33
Q56UQ5 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q56UQ5 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Q56UQ5 AC087742.1-201ENST00000575880 1738 ntBASIC17.1■□□□□ 0.33
Q56UQ5 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Q56UQ5 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.1■□□□□ 0.33
Q56UQ5 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q56UQ5 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Q56UQ5 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q56UQ5 SRD5A1P1-201ENST00000442297 786 ntBASIC17.1■□□□□ 0.33
Q56UQ5 AL356441.2-201ENST00000443009 864 ntBASIC17.1■□□□□ 0.33
Q56UQ5 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Q56UQ5 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC17.1■□□□□ 0.33
Q56UQ5 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC17.1■□□□□ 0.33
Q56UQ5 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Q56UQ5 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q56UQ5 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q56UQ5 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q56UQ5 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Q56UQ5 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q56UQ5 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q56UQ5 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Q56UQ5 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Q56UQ5 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC17.09■□□□□ 0.33
Q56UQ5 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.09■□□□□ 0.33
Q56UQ5 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC17.09■□□□□ 0.33
Q56UQ5 SRR-208ENST00000576848 588 ntTSL 4 BASIC17.09■□□□□ 0.33
Q56UQ5 AC099791.2-201ENST00000605725 427 ntBASIC17.09■□□□□ 0.33
Q56UQ5 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Q56UQ5 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q56UQ5 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Q56UQ5 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q56UQ5 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q56UQ5 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
Q56UQ5 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Q56UQ5 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Q56UQ5 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Q56UQ5 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Q56UQ5 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Q56UQ5 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Q56UQ5 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Q56UQ5 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Q56UQ5 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
Q56UQ5 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Q56UQ5 AL499627.2-201ENST00000606283 725 ntBASIC17.08■□□□□ 0.32
Q56UQ5 pRNA.6-201ENST00000610482 90 ntBASIC17.08■□□□□ 0.32
Q56UQ5 pRNA.5-201ENST00000612139 90 ntBASIC17.08■□□□□ 0.32
Q56UQ5 pRNA.11-201ENST00000618423 90 ntBASIC17.08■□□□□ 0.32
Q56UQ5 pRNA.13-201ENST00000619112 90 ntBASIC17.08■□□□□ 0.32
Q56UQ5 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Q56UQ5 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Q56UQ5 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms