Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
CLTCL1P53675 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC31.42■■■□□ 2.62
CLTCL1P53675 UQCRFS1P1-201ENST00000435169 820 ntBASIC31.42■■■□□ 2.62
CLTCL1P53675 NCF1B-203ENST00000435988 1254 ntBASIC31.42■■■□□ 2.62
CLTCL1P53675 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC31.41■■■□□ 2.62
CLTCL1P53675 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
CLTCL1P53675 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CLTCL1P53675 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CLTCL1P53675 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
CLTCL1P53675 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC31.41■■■□□ 2.62
CLTCL1P53675 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
CLTCL1P53675 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC31.41■■■□□ 2.62
CLTCL1P53675 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC31.41■■■□□ 2.62
CLTCL1P53675 AL355802.2-201ENST00000402069 882 ntBASIC31.41■■■□□ 2.62
CLTCL1P53675 GUSBP6-202ENST00000438529 1198 ntBASIC31.41■■■□□ 2.62
CLTCL1P53675 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC31.41■■■□□ 2.62
CLTCL1P53675 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CLTCL1P53675 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CLTCL1P53675 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
CLTCL1P53675 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC31.4■■■□□ 2.62
CLTCL1P53675 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC31.4■■■□□ 2.62
CLTCL1P53675 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CLTCL1P53675 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC31.4■■■□□ 2.62
CLTCL1P53675 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CLTCL1P53675 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CLTCL1P53675 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CLTCL1P53675 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CLTCL1P53675 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC31.39■■■□□ 2.62
CLTCL1P53675 GAMT-205ENST00000640762 751 ntTSL 5 BASIC31.39■■■□□ 2.62
CLTCL1P53675 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
CLTCL1P53675 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
CLTCL1P53675 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
CLTCL1P53675 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
CLTCL1P53675 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
CLTCL1P53675 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CLTCL1P53675 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC31.38■■■□□ 2.61
CLTCL1P53675 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC31.38■■■□□ 2.61
CLTCL1P53675 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC31.38■■■□□ 2.61
CLTCL1P53675 WT1-AS_3.1-201ENST00000613262 234 ntBASIC31.38■■■□□ 2.61
CLTCL1P53675 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
CLTCL1P53675 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CLTCL1P53675 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CLTCL1P53675 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC31.37■■■□□ 2.61
CLTCL1P53675 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CLTCL1P53675 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC31.37■■■□□ 2.61
CLTCL1P53675 DUX4L16-201ENST00000555130 1264 ntBASIC31.37■■■□□ 2.61
CLTCL1P53675 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC31.37■■■□□ 2.61
CLTCL1P53675 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC31.37■■■□□ 2.61
CLTCL1P53675 MAZ-216ENST00000616501 991 ntTSL 5 BASIC31.37■■■□□ 2.61
CLTCL1P53675 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
CLTCL1P53675 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
CLTCL1P53675 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
CLTCL1P53675 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
CLTCL1P53675 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
CLTCL1P53675 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC31.36■■■□□ 2.61
CLTCL1P53675 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC31.36■■■□□ 2.61
CLTCL1P53675 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CLTCL1P53675 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC31.36■■■□□ 2.61
CLTCL1P53675 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC31.36■■■□□ 2.61
CLTCL1P53675 MYCNOS-205ENST00000641950 531 ntBASIC31.36■■■□□ 2.61
CLTCL1P53675 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
CLTCL1P53675 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC31.35■■■□□ 2.61
CLTCL1P53675 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC31.35■■■□□ 2.61
CLTCL1P53675 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC31.35■■■□□ 2.61
CLTCL1P53675 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC31.35■■■□□ 2.61
CLTCL1P53675 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
CLTCL1P53675 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC31.35■■■□□ 2.61
CLTCL1P53675 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC31.35■■■□□ 2.61
CLTCL1P53675 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC31.35■■■□□ 2.61
CLTCL1P53675 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CLTCL1P53675 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
CLTCL1P53675 SLC7A5P2-201ENST00000553010 536 ntBASIC31.35■■■□□ 2.61
CLTCL1P53675 AL109923.1-201ENST00000618799 583 ntBASIC31.35■■■□□ 2.61
CLTCL1P53675 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC31.34■■■□□ 2.61
CLTCL1P53675 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CLTCL1P53675 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC31.34■■■□□ 2.61
CLTCL1P53675 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC31.34■■■□□ 2.61
CLTCL1P53675 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
CLTCL1P53675 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC31.34■■■□□ 2.61
CLTCL1P53675 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC31.34■■■□□ 2.61
CLTCL1P53675 TFG-210ENST00000620299 1289 ntTSL 5 BASIC31.34■■■□□ 2.61
CLTCL1P53675 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC31.33■■■□□ 2.61
CLTCL1P53675 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CLTCL1P53675 METTL26-203ENST00000397664 604 ntTSL 2 BASIC31.33■■■□□ 2.61
CLTCL1P53675 AC079089.2-201ENST00000531211 1277 ntBASIC31.33■■■□□ 2.61
CLTCL1P53675 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
CLTCL1P53675 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.61
CLTCL1P53675 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
CLTCL1P53675 PARP1-202ENST00000366792 553 ntTSL 3 BASIC31.32■■■□□ 2.6
CLTCL1P53675 CNN2P6-201ENST00000439038 900 ntBASIC31.31■■■□□ 2.6
CLTCL1P53675 AC010141.2-201ENST00000452426 721 ntBASIC31.31■■■□□ 2.6
CLTCL1P53675 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC31.31■■■□□ 2.6
CLTCL1P53675 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC31.31■■■□□ 2.6
CLTCL1P53675 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC31.31■■■□□ 2.6
CLTCL1P53675 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
CLTCL1P53675 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
CLTCL1P53675 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
CLTCL1P53675 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC31.31■■■□□ 2.6
CLTCL1P53675 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
CLTCL1P53675 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms