Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.72■□□□□ 0.43
Thbs1P35441 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Thbs1P35441 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.72■□□□□ 0.43
Thbs1P35441 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
Thbs1P35441 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Thbs1P35441 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Thbs1P35441 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Thbs1P35441 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Thbs1P35441 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.72■□□□□ 0.43
Thbs1P35441 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
Thbs1P35441 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Thbs1P35441 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Thbs1P35441 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Thbs1P35441 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Thbs1P35441 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Thbs1P35441 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Thbs1P35441 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Thbs1P35441 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Thbs1P35441 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Thbs1P35441 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Thbs1P35441 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Thbs1P35441 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Thbs1P35441 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Thbs1P35441 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Thbs1P35441 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Thbs1P35441 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Thbs1P35441 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Thbs1P35441 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Thbs1P35441 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Thbs1P35441 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Thbs1P35441 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Thbs1P35441 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Thbs1P35441 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Thbs1P35441 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.7■□□□□ 0.42
Thbs1P35441 Smad6-203ENSMUST00000179458 273 ntBASIC17.7■□□□□ 0.42
Thbs1P35441 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Thbs1P35441 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.7■□□□□ 0.42
Thbs1P35441 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Thbs1P35441 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Thbs1P35441 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Thbs1P35441 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Thbs1P35441 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Thbs1P35441 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Thbs1P35441 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Thbs1P35441 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Thbs1P35441 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Thbs1P35441 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Thbs1P35441 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Thbs1P35441 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Thbs1P35441 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Thbs1P35441 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Thbs1P35441 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Thbs1P35441 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Thbs1P35441 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Thbs1P35441 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.69■□□□□ 0.42
Thbs1P35441 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.69■□□□□ 0.42
Thbs1P35441 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Thbs1P35441 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Thbs1P35441 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Thbs1P35441 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Thbs1P35441 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.69■□□□□ 0.42
Thbs1P35441 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Thbs1P35441 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Thbs1P35441 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.69■□□□□ 0.42
Thbs1P35441 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.69■□□□□ 0.42
Thbs1P35441 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Thbs1P35441 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Thbs1P35441 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Thbs1P35441 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Thbs1P35441 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Thbs1P35441 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Thbs1P35441 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.68■□□□□ 0.42
Thbs1P35441 Gm43173-201ENSMUST00000202246 593 ntBASIC17.68■□□□□ 0.42
Thbs1P35441 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.68■□□□□ 0.42
Thbs1P35441 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Thbs1P35441 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Thbs1P35441 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Thbs1P35441 Gm11421-201ENSMUST00000122124 294 ntBASIC17.67■□□□□ 0.42
Thbs1P35441 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Thbs1P35441 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.67■□□□□ 0.42
Thbs1P35441 Gm8493-201ENSMUST00000196881 489 ntBASIC17.67■□□□□ 0.42
Thbs1P35441 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.67■□□□□ 0.42
Thbs1P35441 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Thbs1P35441 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Thbs1P35441 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Thbs1P35441 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Thbs1P35441 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Thbs1P35441 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Thbs1P35441 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Thbs1P35441 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Thbs1P35441 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Thbs1P35441 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Thbs1P35441 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Thbs1P35441 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Thbs1P35441 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Thbs1P35441 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Thbs1P35441 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Thbs1P35441 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Thbs1P35441 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Thbs1P35441 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms