Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC26.45■■□□□ 1.82
COL4A5P29400 POU5F1P3-201ENST00000428824 1078 ntBASIC26.45■■□□□ 1.82
COL4A5P29400 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.82
COL4A5P29400 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC26.45■■□□□ 1.82
COL4A5P29400 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
COL4A5P29400 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC26.45■■□□□ 1.82
COL4A5P29400 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
COL4A5P29400 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
COL4A5P29400 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC26.44■■□□□ 1.82
COL4A5P29400 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
COL4A5P29400 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
COL4A5P29400 SERP1-208ENST00000491660 830 ntTSL 2 BASIC26.44■■□□□ 1.82
COL4A5P29400 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC26.44■■□□□ 1.82
COL4A5P29400 AC105036.2-201ENST00000569468 176 ntBASIC26.44■■□□□ 1.82
COL4A5P29400 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC26.44■■□□□ 1.82
COL4A5P29400 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
COL4A5P29400 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
COL4A5P29400 PRORSD1P-201ENST00000295112 541 ntBASIC26.44■■□□□ 1.82
COL4A5P29400 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC26.44■■□□□ 1.82
COL4A5P29400 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC26.44■■□□□ 1.82
COL4A5P29400 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
COL4A5P29400 ITM2C-210ENST00000620962 501 ntBASIC26.44■■□□□ 1.82
COL4A5P29400 AC133041.1-202ENST00000642053 222 ntBASIC26.44■■□□□ 1.82
COL4A5P29400 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
COL4A5P29400 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
COL4A5P29400 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
COL4A5P29400 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
COL4A5P29400 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
COL4A5P29400 AC098590.1-201ENST00000468126 897 ntBASIC26.43■■□□□ 1.82
COL4A5P29400 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC26.43■■□□□ 1.82
COL4A5P29400 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
COL4A5P29400 AC010536.3-201ENST00000620306 533 ntBASIC26.43■■□□□ 1.82
COL4A5P29400 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
COL4A5P29400 AC055733.4-201ENST00000638462 1354 ntBASIC26.43■■□□□ 1.82
COL4A5P29400 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC26.43■■□□□ 1.82
COL4A5P29400 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC26.43■■□□□ 1.82
COL4A5P29400 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC26.43■■□□□ 1.82
COL4A5P29400 AC009237.3-201ENST00000393279 1427 ntBASIC26.43■■□□□ 1.82
COL4A5P29400 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC26.42■■□□□ 1.82
COL4A5P29400 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
COL4A5P29400 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
COL4A5P29400 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC26.42■■□□□ 1.82
COL4A5P29400 CYP2T1P-201ENST00000432607 1285 ntBASIC26.42■■□□□ 1.82
COL4A5P29400 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC26.42■■□□□ 1.82
COL4A5P29400 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
COL4A5P29400 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
COL4A5P29400 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC26.42■■□□□ 1.82
COL4A5P29400 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
COL4A5P29400 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
COL4A5P29400 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
COL4A5P29400 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
COL4A5P29400 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
COL4A5P29400 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
COL4A5P29400 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
COL4A5P29400 RPS2P52-201ENST00000469610 820 ntBASIC26.41■■□□□ 1.82
COL4A5P29400 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC26.41■■□□□ 1.82
COL4A5P29400 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC26.41■■□□□ 1.82
COL4A5P29400 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC26.41■■□□□ 1.82
COL4A5P29400 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
COL4A5P29400 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC26.41■■□□□ 1.82
COL4A5P29400 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC26.41■■□□□ 1.82
COL4A5P29400 AC010141.2-201ENST00000452426 721 ntBASIC26.41■■□□□ 1.82
COL4A5P29400 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC26.41■■□□□ 1.82
COL4A5P29400 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC26.41■■□□□ 1.82
COL4A5P29400 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC26.4■■□□□ 1.82
COL4A5P29400 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC26.4■■□□□ 1.82
COL4A5P29400 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC26.4■■□□□ 1.82
COL4A5P29400 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC26.4■■□□□ 1.82
COL4A5P29400 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
COL4A5P29400 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC26.39■■□□□ 1.82
COL4A5P29400 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
COL4A5P29400 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC26.39■■□□□ 1.82
COL4A5P29400 AC004812.2-201ENST00000611079 2094 ntBASIC26.38■■□□□ 1.81
COL4A5P29400 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
COL4A5P29400 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC26.38■■□□□ 1.81
COL4A5P29400 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC26.38■■□□□ 1.81
COL4A5P29400 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
COL4A5P29400 RNA5SP413-201ENST00000516373 109 ntBASIC26.38■■□□□ 1.81
COL4A5P29400 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
COL4A5P29400 SLC7A5P1-201ENST00000568957 537 ntBASIC26.38■■□□□ 1.81
COL4A5P29400 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
COL4A5P29400 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC26.38■■□□□ 1.81
COL4A5P29400 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
COL4A5P29400 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
COL4A5P29400 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
COL4A5P29400 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
COL4A5P29400 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
COL4A5P29400 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC26.37■■□□□ 1.81
COL4A5P29400 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
COL4A5P29400 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
COL4A5P29400 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
COL4A5P29400 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC26.36■■□□□ 1.81
COL4A5P29400 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
COL4A5P29400 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC26.36■■□□□ 1.81
COL4A5P29400 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
COL4A5P29400 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC26.35■■□□□ 1.81
COL4A5P29400 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
COL4A5P29400 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
COL4A5P29400 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC26.34■■□□□ 1.81
COL4A5P29400 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC26.34■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms