Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.37■□□□□ 0.69
RxrbP28704 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
RxrbP28704 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RxrbP28704 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RxrbP28704 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
RxrbP28704 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.36■□□□□ 0.69
RxrbP28704 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.36■□□□□ 0.69
RxrbP28704 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RxrbP28704 Gm5812-201ENSMUST00000061073 957 ntBASIC19.36■□□□□ 0.69
RxrbP28704 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RxrbP28704 AA386476-201ENSMUST00000098781 1665 ntBASIC19.36■□□□□ 0.69
RxrbP28704 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RxrbP28704 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.35■□□□□ 0.69
RxrbP28704 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RxrbP28704 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RxrbP28704 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
RxrbP28704 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.35■□□□□ 0.69
RxrbP28704 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RxrbP28704 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
RxrbP28704 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RxrbP28704 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RxrbP28704 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RxrbP28704 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RxrbP28704 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RxrbP28704 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.34■□□□□ 0.69
RxrbP28704 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RxrbP28704 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RxrbP28704 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RxrbP28704 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.33■□□□□ 0.69
RxrbP28704 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.33■□□□□ 0.69
RxrbP28704 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.33■□□□□ 0.69
RxrbP28704 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RxrbP28704 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RxrbP28704 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.33■□□□□ 0.68
RxrbP28704 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RxrbP28704 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RxrbP28704 Gm9870-201ENSMUST00000063874 645 ntBASIC19.33■□□□□ 0.68
RxrbP28704 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RxrbP28704 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.33■□□□□ 0.68
RxrbP28704 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RxrbP28704 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RxrbP28704 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RxrbP28704 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RxrbP28704 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RxrbP28704 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RxrbP28704 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RxrbP28704 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
RxrbP28704 Gm7417-201ENSMUST00000192950 473 ntBASIC19.32■□□□□ 0.68
RxrbP28704 Gm15820-201ENSMUST00000201566 728 ntBASIC19.32■□□□□ 0.68
RxrbP28704 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RxrbP28704 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RxrbP28704 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RxrbP28704 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RxrbP28704 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RxrbP28704 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RxrbP28704 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.31■□□□□ 0.68
RxrbP28704 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RxrbP28704 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RxrbP28704 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RxrbP28704 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RxrbP28704 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RxrbP28704 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
RxrbP28704 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RxrbP28704 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RxrbP28704 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RxrbP28704 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.3■□□□□ 0.68
RxrbP28704 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RxrbP28704 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RxrbP28704 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.3■□□□□ 0.68
RxrbP28704 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RxrbP28704 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RxrbP28704 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RxrbP28704 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
RxrbP28704 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RxrbP28704 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RxrbP28704 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RxrbP28704 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RxrbP28704 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
RxrbP28704 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RxrbP28704 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.29■□□□□ 0.68
RxrbP28704 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.29■□□□□ 0.68
RxrbP28704 Gm15546-201ENSMUST00000122095 826 ntBASIC19.29■□□□□ 0.68
RxrbP28704 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RxrbP28704 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RxrbP28704 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.29■□□□□ 0.68
RxrbP28704 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RxrbP28704 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RxrbP28704 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
RxrbP28704 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RxrbP28704 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RxrbP28704 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RxrbP28704 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RxrbP28704 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.28■□□□□ 0.68
RxrbP28704 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RxrbP28704 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RxrbP28704 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RxrbP28704 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RxrbP28704 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RxrbP28704 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.28■□□□□ 0.68
RxrbP28704 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms