Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
CAPN1P07384 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
CAPN1P07384 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CAPN1P07384 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.29■■□□□ 1
CAPN1P07384 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
CAPN1P07384 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
CAPN1P07384 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CAPN1P07384 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CAPN1P07384 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CAPN1P07384 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CAPN1P07384 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
CAPN1P07384 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.28■■□□□ 1
CAPN1P07384 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.28■■□□□ 1
CAPN1P07384 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CAPN1P07384 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CAPN1P07384 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.28■■□□□ 1
CAPN1P07384 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CAPN1P07384 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
CAPN1P07384 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.27■■□□□ 1
CAPN1P07384 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CAPN1P07384 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.27■■□□□ 1
CAPN1P07384 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CAPN1P07384 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CAPN1P07384 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CAPN1P07384 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CAPN1P07384 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.27■■□□□ 1
CAPN1P07384 AC026271.2-201ENST00000428091 497 ntBASIC21.27■■□□□ 1
CAPN1P07384 RARRES2P6-201ENST00000567333 442 ntBASIC21.27■■□□□ 1
CAPN1P07384 MIR3181-201ENST00000578512 73 ntBASIC21.27■■□□□ 1
CAPN1P07384 AC136469.2-201ENST00000623944 1028 ntBASIC21.27■■□□□ 1
CAPN1P07384 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CAPN1P07384 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.27■■□□□ 1
CAPN1P07384 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.26■□□□□ 0.99
CAPN1P07384 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
CAPN1P07384 RASA4CP-201ENST00000424092 1398 ntBASIC21.26■□□□□ 0.99
CAPN1P07384 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CAPN1P07384 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
CAPN1P07384 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CAPN1P07384 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CAPN1P07384 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CAPN1P07384 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.26■□□□□ 0.99
CAPN1P07384 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.26■□□□□ 0.99
CAPN1P07384 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CAPN1P07384 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.26■□□□□ 0.99
CAPN1P07384 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.26■□□□□ 0.99
CAPN1P07384 CA15P2-201ENST00000611168 834 ntBASIC21.26■□□□□ 0.99
CAPN1P07384 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.26■□□□□ 0.99
CAPN1P07384 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.26■□□□□ 0.99
CAPN1P07384 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.26■□□□□ 0.99
CAPN1P07384 C11orf96-202ENST00000528572 1834 ntBASIC21.26■□□□□ 0.99
CAPN1P07384 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CAPN1P07384 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CAPN1P07384 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CAPN1P07384 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CAPN1P07384 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CAPN1P07384 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CAPN1P07384 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CAPN1P07384 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CAPN1P07384 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CAPN1P07384 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CAPN1P07384 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
CAPN1P07384 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
CAPN1P07384 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CAPN1P07384 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CAPN1P07384 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.25■□□□□ 0.99
CAPN1P07384 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CAPN1P07384 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.25■□□□□ 0.99
CAPN1P07384 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CAPN1P07384 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CAPN1P07384 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
CAPN1P07384 AC137767.1-201ENST00000602918 1920 ntBASIC21.25■□□□□ 0.99
CAPN1P07384 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CAPN1P07384 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CAPN1P07384 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CAPN1P07384 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CAPN1P07384 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.24■□□□□ 0.99
CAPN1P07384 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.24■□□□□ 0.99
CAPN1P07384 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CAPN1P07384 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.24■□□□□ 0.99
CAPN1P07384 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CAPN1P07384 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.24■□□□□ 0.99
CAPN1P07384 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CAPN1P07384 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CAPN1P07384 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.24■□□□□ 0.99
CAPN1P07384 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
CAPN1P07384 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.24■□□□□ 0.99
CAPN1P07384 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CAPN1P07384 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CAPN1P07384 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CAPN1P07384 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.23■□□□□ 0.99
CAPN1P07384 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CAPN1P07384 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CAPN1P07384 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.23■□□□□ 0.99
CAPN1P07384 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.23■□□□□ 0.99
CAPN1P07384 AC027682.1-201ENST00000562846 899 ntBASIC21.23■□□□□ 0.99
CAPN1P07384 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.23■□□□□ 0.99
CAPN1P07384 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CAPN1P07384 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CAPN1P07384 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CAPN1P07384 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms