Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
USP1O94782 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.9■■□□□ 1.1
USP1O94782 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
USP1O94782 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
USP1O94782 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
USP1O94782 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.9■■□□□ 1.1
USP1O94782 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
USP1O94782 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.9■■□□□ 1.1
USP1O94782 FBXW4P1-201ENST00000426721 2239 ntBASIC21.9■■□□□ 1.1
USP1O94782 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
USP1O94782 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
USP1O94782 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
USP1O94782 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.89■■□□□ 1.09
USP1O94782 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
USP1O94782 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.89■■□□□ 1.09
USP1O94782 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.89■■□□□ 1.09
USP1O94782 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.89■■□□□ 1.09
USP1O94782 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.89■■□□□ 1.09
USP1O94782 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
USP1O94782 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
USP1O94782 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
USP1O94782 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
USP1O94782 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
USP1O94782 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
USP1O94782 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.88■■□□□ 1.09
USP1O94782 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.88■■□□□ 1.09
USP1O94782 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
USP1O94782 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
USP1O94782 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
USP1O94782 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
USP1O94782 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
USP1O94782 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
USP1O94782 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
USP1O94782 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
USP1O94782 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
USP1O94782 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.87■■□□□ 1.09
USP1O94782 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
USP1O94782 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
USP1O94782 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
USP1O94782 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.87■■□□□ 1.09
USP1O94782 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
USP1O94782 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
USP1O94782 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
USP1O94782 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
USP1O94782 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.87■■□□□ 1.09
USP1O94782 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
USP1O94782 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
USP1O94782 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.87■■□□□ 1.09
USP1O94782 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.86■■□□□ 1.09
USP1O94782 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
USP1O94782 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
USP1O94782 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
USP1O94782 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
USP1O94782 SRD5A1P1-201ENST00000442297 786 ntBASIC21.86■■□□□ 1.09
USP1O94782 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.86■■□□□ 1.09
USP1O94782 AL512631.2-201ENST00000604634 923 ntBASIC21.86■■□□□ 1.09
USP1O94782 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.86■■□□□ 1.09
USP1O94782 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
USP1O94782 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
USP1O94782 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
USP1O94782 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
USP1O94782 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
USP1O94782 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
USP1O94782 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
USP1O94782 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
USP1O94782 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.85■■□□□ 1.09
USP1O94782 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.85■■□□□ 1.09
USP1O94782 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
USP1O94782 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
USP1O94782 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
USP1O94782 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.85■■□□□ 1.09
USP1O94782 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
USP1O94782 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
USP1O94782 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.85■■□□□ 1.09
USP1O94782 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.85■■□□□ 1.09
USP1O94782 MIR3181-201ENST00000578512 73 ntBASIC21.85■■□□□ 1.09
USP1O94782 AC092171.4-201ENST00000609130 632 ntBASIC21.85■■□□□ 1.09
USP1O94782 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
USP1O94782 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
USP1O94782 SLC25A24-204ENST00000569674 2357 ntBASIC21.85■■□□□ 1.09
USP1O94782 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
USP1O94782 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
USP1O94782 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.85■■□□□ 1.09
USP1O94782 AC010542.4-201ENST00000563151 1910 ntBASIC21.84■■□□□ 1.09
USP1O94782 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
USP1O94782 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
USP1O94782 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.84■■□□□ 1.09
USP1O94782 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.84■■□□□ 1.09
USP1O94782 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
USP1O94782 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.84■■□□□ 1.09
USP1O94782 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.84■■□□□ 1.09
USP1O94782 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
USP1O94782 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.84■■□□□ 1.09
USP1O94782 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.83■■□□□ 1.09
USP1O94782 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.83■■□□□ 1.09
USP1O94782 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
USP1O94782 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
USP1O94782 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.83■■□□□ 1.09
USP1O94782 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
USP1O94782 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.83■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms