Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
GFRA3O60609 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.45■■□□□ 1.02
GFRA3O60609 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
GFRA3O60609 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
GFRA3O60609 AC005224.4-201ENST00000583262 1652 ntBASIC21.44■■□□□ 1.02
GFRA3O60609 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.44■■□□□ 1.02
GFRA3O60609 AC010141.3-201ENST00000456659 717 ntBASIC21.44■■□□□ 1.02
GFRA3O60609 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.44■■□□□ 1.02
GFRA3O60609 MIR6089-201ENST00000616698 64 ntBASIC21.44■■□□□ 1.02
GFRA3O60609 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.44■■□□□ 1.02
GFRA3O60609 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
GFRA3O60609 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
GFRA3O60609 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
GFRA3O60609 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.43■■□□□ 1.02
GFRA3O60609 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
GFRA3O60609 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
GFRA3O60609 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.43■■□□□ 1.02
GFRA3O60609 RCN1P1-201ENST00000400413 996 ntBASIC21.43■■□□□ 1.02
GFRA3O60609 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.43■■□□□ 1.02
GFRA3O60609 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
GFRA3O60609 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.43■■□□□ 1.02
GFRA3O60609 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.43■■□□□ 1.02
GFRA3O60609 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.43■■□□□ 1.02
GFRA3O60609 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.43■■□□□ 1.02
GFRA3O60609 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.43■■□□□ 1.02
GFRA3O60609 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
GFRA3O60609 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
GFRA3O60609 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.43■■□□□ 1.02
GFRA3O60609 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
GFRA3O60609 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
GFRA3O60609 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
GFRA3O60609 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
GFRA3O60609 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.42■■□□□ 1.02
GFRA3O60609 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
GFRA3O60609 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
GFRA3O60609 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
GFRA3O60609 C1QBPP2-201ENST00000528754 825 ntBASIC21.42■■□□□ 1.02
GFRA3O60609 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC21.42■■□□□ 1.02
GFRA3O60609 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
GFRA3O60609 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
GFRA3O60609 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
GFRA3O60609 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
GFRA3O60609 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
GFRA3O60609 LINC01529-204ENST00000636474 1715 ntBASIC21.41■■□□□ 1.02
GFRA3O60609 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
GFRA3O60609 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
GFRA3O60609 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
GFRA3O60609 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.41■■□□□ 1.02
GFRA3O60609 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
GFRA3O60609 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
GFRA3O60609 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
GFRA3O60609 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
GFRA3O60609 KRT18P20-201ENST00000548986 1279 ntBASIC21.41■■□□□ 1.02
GFRA3O60609 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.41■■□□□ 1.02
GFRA3O60609 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
GFRA3O60609 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.4■■□□□ 1.02
GFRA3O60609 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
GFRA3O60609 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.4■■□□□ 1.02
GFRA3O60609 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
GFRA3O60609 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
GFRA3O60609 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.4■■□□□ 1.02
GFRA3O60609 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.4■■□□□ 1.02
GFRA3O60609 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.4■■□□□ 1.02
GFRA3O60609 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.4■■□□□ 1.02
GFRA3O60609 CYP2T3P-201ENST00000601990 817 ntBASIC21.4■■□□□ 1.02
GFRA3O60609 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.4■■□□□ 1.02
GFRA3O60609 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.4■■□□□ 1.02
GFRA3O60609 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
GFRA3O60609 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.4■■□□□ 1.02
GFRA3O60609 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
GFRA3O60609 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.39■■□□□ 1.02
GFRA3O60609 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.39■■□□□ 1.02
GFRA3O60609 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.39■■□□□ 1.02
GFRA3O60609 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
GFRA3O60609 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
GFRA3O60609 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
GFRA3O60609 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
GFRA3O60609 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
GFRA3O60609 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.39■■□□□ 1.01
GFRA3O60609 AC007322.4-201ENST00000509611 723 ntBASIC21.39■■□□□ 1.01
GFRA3O60609 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
GFRA3O60609 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
GFRA3O60609 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
GFRA3O60609 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
GFRA3O60609 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC21.38■■□□□ 1.01
GFRA3O60609 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
GFRA3O60609 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.38■■□□□ 1.01
GFRA3O60609 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.38■■□□□ 1.01
GFRA3O60609 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.38■■□□□ 1.01
GFRA3O60609 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.38■■□□□ 1.01
GFRA3O60609 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.38■■□□□ 1.01
GFRA3O60609 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
GFRA3O60609 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.38■■□□□ 1.01
GFRA3O60609 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
GFRA3O60609 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
GFRA3O60609 PPOX-219ENST00000544598 813 ntTSL 2 BASIC21.37■■□□□ 1.01
GFRA3O60609 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC21.37■■□□□ 1.01
GFRA3O60609 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.37■■□□□ 1.01
GFRA3O60609 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.37■■□□□ 1.01
GFRA3O60609 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms