Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CXCL13O43927 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CXCL13O43927 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CXCL13O43927 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CXCL13O43927 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.42■□□□□ 0.7
CXCL13O43927 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.42■□□□□ 0.7
CXCL13O43927 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.42■□□□□ 0.7
CXCL13O43927 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.42■□□□□ 0.7
CXCL13O43927 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CXCL13O43927 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.42■□□□□ 0.7
CXCL13O43927 AC137767.1-201ENST00000602918 1920 ntBASIC19.42■□□□□ 0.7
CXCL13O43927 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CXCL13O43927 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CXCL13O43927 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CXCL13O43927 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CXCL13O43927 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CXCL13O43927 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.42■□□□□ 0.7
CXCL13O43927 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CXCL13O43927 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CXCL13O43927 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CXCL13O43927 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CXCL13O43927 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CXCL13O43927 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CXCL13O43927 AC027612.3-201ENST00000413684 1047 ntBASIC19.41■□□□□ 0.7
CXCL13O43927 AC026271.2-201ENST00000428091 497 ntBASIC19.41■□□□□ 0.7
CXCL13O43927 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CXCL13O43927 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CXCL13O43927 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.41■□□□□ 0.7
CXCL13O43927 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.41■□□□□ 0.7
CXCL13O43927 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CXCL13O43927 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CXCL13O43927 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CXCL13O43927 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.4■□□□□ 0.7
CXCL13O43927 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.4■□□□□ 0.7
CXCL13O43927 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CXCL13O43927 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.4■□□□□ 0.7
CXCL13O43927 AC068473.5-201ENST00000616428 2072 ntBASIC19.4■□□□□ 0.7
CXCL13O43927 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CXCL13O43927 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CXCL13O43927 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CXCL13O43927 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.4■□□□□ 0.7
CXCL13O43927 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CXCL13O43927 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CXCL13O43927 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CXCL13O43927 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CXCL13O43927 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CXCL13O43927 YBX1P1-201ENST00000445822 960 ntBASIC19.39■□□□□ 0.69
CXCL13O43927 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CXCL13O43927 OR7E47P-201ENST00000546390 1422 ntBASIC19.39■□□□□ 0.69
CXCL13O43927 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.39■□□□□ 0.69
CXCL13O43927 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CXCL13O43927 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.39■□□□□ 0.69
CXCL13O43927 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CXCL13O43927 LINC00526-201ENST00000581067 1875 ntBASIC19.39■□□□□ 0.69
CXCL13O43927 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CXCL13O43927 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CXCL13O43927 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CXCL13O43927 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CXCL13O43927 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CXCL13O43927 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CXCL13O43927 AC097381.1-201ENST00000429019 1296 ntBASIC19.38■□□□□ 0.69
CXCL13O43927 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CXCL13O43927 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CXCL13O43927 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CXCL13O43927 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.38■□□□□ 0.69
CXCL13O43927 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.38■□□□□ 0.69
CXCL13O43927 MIR6821-201ENST00000617625 74 ntBASIC19.38■□□□□ 0.69
CXCL13O43927 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CXCL13O43927 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CXCL13O43927 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
CXCL13O43927 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CXCL13O43927 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CXCL13O43927 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CXCL13O43927 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.37■□□□□ 0.69
CXCL13O43927 BX005040.4-201ENST00000637145 1518 ntBASIC19.37■□□□□ 0.69
CXCL13O43927 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CXCL13O43927 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CXCL13O43927 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CXCL13O43927 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.37■□□□□ 0.69
CXCL13O43927 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CXCL13O43927 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CXCL13O43927 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.37■□□□□ 0.69
CXCL13O43927 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.37■□□□□ 0.69
CXCL13O43927 AC087623.3-201ENST00000607047 1098 ntBASIC19.37■□□□□ 0.69
CXCL13O43927 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CXCL13O43927 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CXCL13O43927 AC139530.1-201ENST00000575312 1977 ntBASIC19.37■□□□□ 0.69
CXCL13O43927 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CXCL13O43927 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.37■□□□□ 0.69
CXCL13O43927 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CXCL13O43927 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CXCL13O43927 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CXCL13O43927 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.36■□□□□ 0.69
CXCL13O43927 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CXCL13O43927 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CXCL13O43927 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.36■□□□□ 0.69
CXCL13O43927 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CXCL13O43927 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CXCL13O43927 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CXCL13O43927 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms