Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
FOXN1O15353 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC25.97■■□□□ 1.75
FOXN1O15353 AC007322.1-201ENST00000426983 750 ntBASIC25.97■■□□□ 1.75
FOXN1O15353 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
FOXN1O15353 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
FOXN1O15353 TESC-206ENST00000541210 936 ntTSL 3 BASIC25.97■■□□□ 1.75
FOXN1O15353 SLC7A5P1-201ENST00000568957 537 ntBASIC25.97■■□□□ 1.75
FOXN1O15353 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC25.97■■□□□ 1.75
FOXN1O15353 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
FOXN1O15353 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
FOXN1O15353 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
FOXN1O15353 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
FOXN1O15353 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
FOXN1O15353 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC25.96■■□□□ 1.75
FOXN1O15353 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
FOXN1O15353 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
FOXN1O15353 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
FOXN1O15353 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC25.96■■□□□ 1.75
FOXN1O15353 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC25.96■■□□□ 1.75
FOXN1O15353 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC25.96■■□□□ 1.75
FOXN1O15353 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
FOXN1O15353 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC25.96■■□□□ 1.75
FOXN1O15353 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
FOXN1O15353 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
FOXN1O15353 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
FOXN1O15353 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.75
FOXN1O15353 ECEL1P3-201ENST00000427961 737 ntBASIC25.95■■□□□ 1.74
FOXN1O15353 AL158047.1-201ENST00000445918 881 ntBASIC25.95■■□□□ 1.74
FOXN1O15353 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
FOXN1O15353 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC25.95■■□□□ 1.74
FOXN1O15353 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.95■■□□□ 1.74
FOXN1O15353 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
FOXN1O15353 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
FOXN1O15353 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC25.95■■□□□ 1.74
FOXN1O15353 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
FOXN1O15353 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
FOXN1O15353 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC25.94■■□□□ 1.74
FOXN1O15353 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC25.94■■□□□ 1.74
FOXN1O15353 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC25.94■■□□□ 1.74
FOXN1O15353 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC25.94■■□□□ 1.74
FOXN1O15353 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
FOXN1O15353 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC25.93■■□□□ 1.74
FOXN1O15353 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
FOXN1O15353 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC25.93■■□□□ 1.74
FOXN1O15353 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
FOXN1O15353 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
FOXN1O15353 BAALC-201ENST00000297574 801 ntTSL 3 BASIC25.93■■□□□ 1.74
FOXN1O15353 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
FOXN1O15353 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC25.93■■□□□ 1.74
FOXN1O15353 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC25.93■■□□□ 1.74
FOXN1O15353 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC25.93■■□□□ 1.74
FOXN1O15353 DUX4L16-201ENST00000555130 1264 ntBASIC25.93■■□□□ 1.74
FOXN1O15353 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC25.93■■□□□ 1.74
FOXN1O15353 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC25.93■■□□□ 1.74
FOXN1O15353 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC25.93■■□□□ 1.74
FOXN1O15353 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
FOXN1O15353 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
FOXN1O15353 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
FOXN1O15353 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC25.92■■□□□ 1.74
FOXN1O15353 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC25.92■■□□□ 1.74
FOXN1O15353 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC25.92■■□□□ 1.74
FOXN1O15353 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
FOXN1O15353 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
FOXN1O15353 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC25.92■■□□□ 1.74
FOXN1O15353 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC25.92■■□□□ 1.74
FOXN1O15353 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC25.92■■□□□ 1.74
FOXN1O15353 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC25.92■■□□□ 1.74
FOXN1O15353 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC25.92■■□□□ 1.74
FOXN1O15353 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC25.92■■□□□ 1.74
FOXN1O15353 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
FOXN1O15353 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.92■■□□□ 1.74
FOXN1O15353 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC25.91■■□□□ 1.74
FOXN1O15353 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC25.91■■□□□ 1.74
FOXN1O15353 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
FOXN1O15353 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC25.91■■□□□ 1.74
FOXN1O15353 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
FOXN1O15353 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
FOXN1O15353 OR2I1P-207ENST00000453522 948 ntBASIC25.91■■□□□ 1.74
FOXN1O15353 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
FOXN1O15353 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
FOXN1O15353 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC25.9■■□□□ 1.74
FOXN1O15353 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC25.9■■□□□ 1.74
FOXN1O15353 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
FOXN1O15353 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC25.9■■□□□ 1.74
FOXN1O15353 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC25.9■■□□□ 1.74
FOXN1O15353 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC25.9■■□□□ 1.74
FOXN1O15353 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC25.9■■□□□ 1.74
FOXN1O15353 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC25.9■■□□□ 1.74
FOXN1O15353 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
FOXN1O15353 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC25.9■■□□□ 1.74
FOXN1O15353 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
FOXN1O15353 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
FOXN1O15353 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.74
FOXN1O15353 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC25.89■■□□□ 1.74
FOXN1O15353 IRX5-204ENST00000560154 879 ntTSL 5 BASIC25.89■■□□□ 1.74
FOXN1O15353 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC25.89■■□□□ 1.74
FOXN1O15353 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.74
FOXN1O15353 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC25.89■■□□□ 1.74
FOXN1O15353 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
FOXN1O15353 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms