Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC26.27■■□□□ 1.8
SEMA3EO15041 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SEMA3EO15041 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC26.27■■□□□ 1.8
SEMA3EO15041 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC26.27■■□□□ 1.8
SEMA3EO15041 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SEMA3EO15041 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SEMA3EO15041 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC26.27■■□□□ 1.8
SEMA3EO15041 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
SEMA3EO15041 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SEMA3EO15041 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SEMA3EO15041 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
SEMA3EO15041 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SEMA3EO15041 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
SEMA3EO15041 DLX3-202ENST00000512495 834 ntTSL 2 BASIC26.26■■□□□ 1.79
SEMA3EO15041 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SEMA3EO15041 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
SEMA3EO15041 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SEMA3EO15041 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
SEMA3EO15041 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SEMA3EO15041 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SEMA3EO15041 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC26.25■■□□□ 1.79
SEMA3EO15041 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC26.25■■□□□ 1.79
SEMA3EO15041 AC090192.1-201ENST00000517740 490 ntBASIC26.25■■□□□ 1.79
SEMA3EO15041 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC26.25■■□□□ 1.79
SEMA3EO15041 VPS53-216ENST00000574029 585 ntTSL 4 BASIC26.25■■□□□ 1.79
SEMA3EO15041 NFE2L3P1-201ENST00000588207 1959 ntBASIC26.25■■□□□ 1.79
SEMA3EO15041 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC26.25■■□□□ 1.79
SEMA3EO15041 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC26.25■■□□□ 1.79
SEMA3EO15041 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
SEMA3EO15041 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC26.24■■□□□ 1.79
SEMA3EO15041 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SEMA3EO15041 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SEMA3EO15041 STX7-201ENST00000367937 1090 ntTSL 5 BASIC26.24■■□□□ 1.79
SEMA3EO15041 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SEMA3EO15041 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SEMA3EO15041 AC137761.2-201ENST00000561729 223 ntBASIC26.24■■□□□ 1.79
SEMA3EO15041 AC145350.3-201ENST00000569033 163 ntBASIC26.24■■□□□ 1.79
SEMA3EO15041 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
SEMA3EO15041 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC26.24■■□□□ 1.79
SEMA3EO15041 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
SEMA3EO15041 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SEMA3EO15041 OR7E47P-201ENST00000546390 1422 ntBASIC26.23■■□□□ 1.79
SEMA3EO15041 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SEMA3EO15041 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SEMA3EO15041 HSCB-202ENST00000398941 955 ntTSL 2 BASIC26.23■■□□□ 1.79
SEMA3EO15041 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
SEMA3EO15041 TESC-206ENST00000541210 936 ntTSL 3 BASIC26.23■■□□□ 1.79
SEMA3EO15041 DBI-210ENST00000542275 757 ntTSL 5 BASIC26.23■■□□□ 1.79
SEMA3EO15041 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
SEMA3EO15041 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
SEMA3EO15041 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
SEMA3EO15041 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
SEMA3EO15041 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SEMA3EO15041 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SEMA3EO15041 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC26.23■■□□□ 1.79
SEMA3EO15041 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
SEMA3EO15041 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC26.22■■□□□ 1.79
SEMA3EO15041 AC055733.4-201ENST00000638462 1354 ntBASIC26.22■■□□□ 1.79
SEMA3EO15041 LINC00526-201ENST00000581067 1875 ntBASIC26.22■■□□□ 1.79
SEMA3EO15041 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SEMA3EO15041 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC26.22■■□□□ 1.79
SEMA3EO15041 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC26.22■■□□□ 1.79
SEMA3EO15041 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC26.22■■□□□ 1.79
SEMA3EO15041 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SEMA3EO15041 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC26.22■■□□□ 1.79
SEMA3EO15041 KRT87P-202ENST00000534226 1464 ntBASIC26.22■■□□□ 1.79
SEMA3EO15041 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SEMA3EO15041 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SEMA3EO15041 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
SEMA3EO15041 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
SEMA3EO15041 AL034346.1-201ENST00000568244 1277 ntBASIC26.21■■□□□ 1.79
SEMA3EO15041 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC26.21■■□□□ 1.79
SEMA3EO15041 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC26.2■■□□□ 1.79
SEMA3EO15041 GAS2L1P2-201ENST00000436355 1356 ntBASIC26.2■■□□□ 1.79
SEMA3EO15041 AC087742.1-201ENST00000575880 1738 ntBASIC26.2■■□□□ 1.79
SEMA3EO15041 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC26.2■■□□□ 1.78
SEMA3EO15041 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
SEMA3EO15041 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
SEMA3EO15041 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
SEMA3EO15041 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC26.2■■□□□ 1.78
SEMA3EO15041 AC016769.1-201ENST00000409132 1010 ntBASIC26.2■■□□□ 1.78
SEMA3EO15041 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC26.2■■□□□ 1.78
SEMA3EO15041 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC26.2■■□□□ 1.78
SEMA3EO15041 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
SEMA3EO15041 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC26.19■■□□□ 1.78
SEMA3EO15041 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SEMA3EO15041 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SEMA3EO15041 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC26.19■■□□□ 1.78
SEMA3EO15041 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC26.19■■□□□ 1.78
SEMA3EO15041 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC26.19■■□□□ 1.78
SEMA3EO15041 PXK-203ENST00000383715 1756 ntTSL 5 BASIC26.19■■□□□ 1.78
SEMA3EO15041 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC26.19■■□□□ 1.78
SEMA3EO15041 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
SEMA3EO15041 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
SEMA3EO15041 AP004607.7-201ENST00000527152 1677 ntBASIC26.19■■□□□ 1.78
SEMA3EO15041 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
SEMA3EO15041 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
SEMA3EO15041 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC26.18■■□□□ 1.78
SEMA3EO15041 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
SEMA3EO15041 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC26.18■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms