Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
UPK1AO00322 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.58■□□□□ 0.89
UPK1AO00322 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
UPK1AO00322 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.58■□□□□ 0.89
UPK1AO00322 AC010542.4-201ENST00000563151 1910 ntBASIC20.58■□□□□ 0.88
UPK1AO00322 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
UPK1AO00322 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.58■□□□□ 0.88
UPK1AO00322 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UPK1AO00322 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.57■□□□□ 0.88
UPK1AO00322 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.57■□□□□ 0.88
UPK1AO00322 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UPK1AO00322 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.57■□□□□ 0.88
UPK1AO00322 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
UPK1AO00322 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
UPK1AO00322 AC092171.4-201ENST00000609130 632 ntBASIC20.57■□□□□ 0.88
UPK1AO00322 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
UPK1AO00322 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
UPK1AO00322 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.57■□□□□ 0.88
UPK1AO00322 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
UPK1AO00322 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.57■□□□□ 0.88
UPK1AO00322 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
UPK1AO00322 AC133637.1-201ENST00000624115 1537 ntBASIC20.57■□□□□ 0.88
UPK1AO00322 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
UPK1AO00322 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
UPK1AO00322 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
UPK1AO00322 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.56■□□□□ 0.88
UPK1AO00322 MIR3181-201ENST00000578512 73 ntBASIC20.56■□□□□ 0.88
UPK1AO00322 AC131212.1-201ENST00000613771 668 ntBASIC20.56■□□□□ 0.88
UPK1AO00322 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
UPK1AO00322 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UPK1AO00322 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
UPK1AO00322 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UPK1AO00322 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
UPK1AO00322 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
UPK1AO00322 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
UPK1AO00322 LINC01960-201ENST00000563759 1884 ntBASIC20.56■□□□□ 0.88
UPK1AO00322 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UPK1AO00322 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UPK1AO00322 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.55■□□□□ 0.88
UPK1AO00322 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UPK1AO00322 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.55■□□□□ 0.88
UPK1AO00322 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.55■□□□□ 0.88
UPK1AO00322 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
UPK1AO00322 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
UPK1AO00322 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.55■□□□□ 0.88
UPK1AO00322 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
UPK1AO00322 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UPK1AO00322 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UPK1AO00322 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UPK1AO00322 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
UPK1AO00322 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
UPK1AO00322 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
UPK1AO00322 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UPK1AO00322 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.54■□□□□ 0.88
UPK1AO00322 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
UPK1AO00322 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UPK1AO00322 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
UPK1AO00322 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
UPK1AO00322 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
UPK1AO00322 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UPK1AO00322 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UPK1AO00322 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UPK1AO00322 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
UPK1AO00322 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
UPK1AO00322 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.53■□□□□ 0.88
UPK1AO00322 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
UPK1AO00322 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
UPK1AO00322 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
UPK1AO00322 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UPK1AO00322 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
UPK1AO00322 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UPK1AO00322 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.53■□□□□ 0.88
UPK1AO00322 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.53■□□□□ 0.88
UPK1AO00322 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.53■□□□□ 0.88
UPK1AO00322 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
UPK1AO00322 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
UPK1AO00322 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
UPK1AO00322 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.52■□□□□ 0.88
UPK1AO00322 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
UPK1AO00322 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
UPK1AO00322 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
UPK1AO00322 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
UPK1AO00322 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
UPK1AO00322 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
UPK1AO00322 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
UPK1AO00322 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
UPK1AO00322 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
UPK1AO00322 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
UPK1AO00322 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
UPK1AO00322 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.51■□□□□ 0.87
UPK1AO00322 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
UPK1AO00322 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
UPK1AO00322 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
UPK1AO00322 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
UPK1AO00322 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
UPK1AO00322 AL136116.3-201ENST00000402907 1138 ntBASIC20.51■□□□□ 0.87
UPK1AO00322 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.51■□□□□ 0.87
UPK1AO00322 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
UPK1AO00322 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.51■□□□□ 0.87
UPK1AO00322 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms