Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdh11xF6ZNL5 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC21.28■■□□□ 1
Pcdh11xF6ZNL5 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdh11xF6ZNL5 AC126028.2-201ENSMUST00000228100 1833 ntBASIC21.28■■□□□ 1
Pcdh11xF6ZNL5 AC137127.1-201ENSMUST00000213466 1078 ntBASIC21.28■■□□□ 1
Pcdh11xF6ZNL5 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdh11xF6ZNL5 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.27■■□□□ 1
Pcdh11xF6ZNL5 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC21.27■■□□□ 1
Pcdh11xF6ZNL5 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC21.27■■□□□ 1
Pcdh11xF6ZNL5 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdh11xF6ZNL5 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC21.27■■□□□ 1
Pcdh11xF6ZNL5 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Pcdh11xF6ZNL5 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
Pcdh11xF6ZNL5 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
Pcdh11xF6ZNL5 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Pcdh11xF6ZNL5 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdh11xF6ZNL5 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdh11xF6ZNL5 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdh11xF6ZNL5 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdh11xF6ZNL5 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdh11xF6ZNL5 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Pcdh11xF6ZNL5 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdh11xF6ZNL5 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdh11xF6ZNL5 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdh11xF6ZNL5 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdh11xF6ZNL5 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC21.26■□□□□ 0.99
Pcdh11xF6ZNL5 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdh11xF6ZNL5 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdh11xF6ZNL5 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC21.25■□□□□ 0.99
Pcdh11xF6ZNL5 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdh11xF6ZNL5 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdh11xF6ZNL5 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdh11xF6ZNL5 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdh11xF6ZNL5 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdh11xF6ZNL5 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Pcdh11xF6ZNL5 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdh11xF6ZNL5 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdh11xF6ZNL5 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdh11xF6ZNL5 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdh11xF6ZNL5 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdh11xF6ZNL5 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdh11xF6ZNL5 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Pcdh11xF6ZNL5 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdh11xF6ZNL5 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdh11xF6ZNL5 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdh11xF6ZNL5 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdh11xF6ZNL5 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdh11xF6ZNL5 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdh11xF6ZNL5 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC21.23■□□□□ 0.99
Pcdh11xF6ZNL5 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdh11xF6ZNL5 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdh11xF6ZNL5 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdh11xF6ZNL5 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdh11xF6ZNL5 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdh11xF6ZNL5 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Pcdh11xF6ZNL5 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdh11xF6ZNL5 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC21.23■□□□□ 0.99
Pcdh11xF6ZNL5 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdh11xF6ZNL5 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdh11xF6ZNL5 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdh11xF6ZNL5 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
Pcdh11xF6ZNL5 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdh11xF6ZNL5 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdh11xF6ZNL5 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Pcdh11xF6ZNL5 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdh11xF6ZNL5 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Pcdh11xF6ZNL5 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdh11xF6ZNL5 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdh11xF6ZNL5 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC21.22■□□□□ 0.99
Pcdh11xF6ZNL5 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC21.22■□□□□ 0.99
Pcdh11xF6ZNL5 CT030146.1-201ENSMUST00000220919 217 ntBASIC21.22■□□□□ 0.99
Pcdh11xF6ZNL5 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdh11xF6ZNL5 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdh11xF6ZNL5 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdh11xF6ZNL5 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC21.22■□□□□ 0.99
Pcdh11xF6ZNL5 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdh11xF6ZNL5 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Pcdh11xF6ZNL5 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdh11xF6ZNL5 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdh11xF6ZNL5 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdh11xF6ZNL5 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Pcdh11xF6ZNL5 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdh11xF6ZNL5 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdh11xF6ZNL5 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdh11xF6ZNL5 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdh11xF6ZNL5 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Pcdh11xF6ZNL5 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdh11xF6ZNL5 Gm26833-201ENSMUST00000180899 440 ntBASIC21.21■□□□□ 0.99
Pcdh11xF6ZNL5 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC21.21■□□□□ 0.99
Pcdh11xF6ZNL5 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdh11xF6ZNL5 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdh11xF6ZNL5 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdh11xF6ZNL5 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Pcdh11xF6ZNL5 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdh11xF6ZNL5 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC21.2■□□□□ 0.98
Pcdh11xF6ZNL5 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdh11xF6ZNL5 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdh11xF6ZNL5 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdh11xF6ZNL5 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdh11xF6ZNL5 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms