Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC15.7■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.69■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC15.69■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC15.69■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC15.69■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC15.68■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC15.68■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.67■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC15.67■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC15.67■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Gm37352-201ENSMUST00000193908 2181 ntBASIC15.67■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC15.67■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Gm27045-201ENSMUST00000182145 1402 ntBASIC15.67■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC15.66■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.66■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC15.66■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Gm6085-201ENSMUST00000182774 1470 ntBASIC15.65■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC15.65■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Trav15-2-dv6-2A0A075B650 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC15.64■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms