Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trbv4A0A075B5I2 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Trbv4A0A075B5I2 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Trbv4A0A075B5I2 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trbv4A0A075B5I2 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Trbv4A0A075B5I2 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trbv4A0A075B5I2 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Trbv4A0A075B5I2 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trbv4A0A075B5I2 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trbv4A0A075B5I2 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trbv4A0A075B5I2 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trbv4A0A075B5I2 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trbv4A0A075B5I2 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trbv4A0A075B5I2 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trbv4A0A075B5I2 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trbv4A0A075B5I2 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trbv4A0A075B5I2 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trbv4A0A075B5I2 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trbv4A0A075B5I2 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Trbv4A0A075B5I2 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trbv4A0A075B5I2 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trbv4A0A075B5I2 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
Trbv4A0A075B5I2 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.27■□□□□ 0.68
Trbv4A0A075B5I2 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.27■□□□□ 0.68
Trbv4A0A075B5I2 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Trbv4A0A075B5I2 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Trbv4A0A075B5I2 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Trbv4A0A075B5I2 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trbv4A0A075B5I2 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trbv4A0A075B5I2 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trbv4A0A075B5I2 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trbv4A0A075B5I2 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trbv4A0A075B5I2 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trbv4A0A075B5I2 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Trbv4A0A075B5I2 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trbv4A0A075B5I2 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trbv4A0A075B5I2 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trbv4A0A075B5I2 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trbv4A0A075B5I2 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.26■□□□□ 0.67
Trbv4A0A075B5I2 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trbv4A0A075B5I2 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Trbv4A0A075B5I2 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trbv4A0A075B5I2 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trbv4A0A075B5I2 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trbv4A0A075B5I2 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trbv4A0A075B5I2 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trbv4A0A075B5I2 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trbv4A0A075B5I2 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trbv4A0A075B5I2 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trbv4A0A075B5I2 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trbv4A0A075B5I2 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trbv4A0A075B5I2 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trbv4A0A075B5I2 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Trbv4A0A075B5I2 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.25■□□□□ 0.67
Trbv4A0A075B5I2 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trbv4A0A075B5I2 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trbv4A0A075B5I2 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trbv4A0A075B5I2 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trbv4A0A075B5I2 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trbv4A0A075B5I2 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
Trbv4A0A075B5I2 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.24■□□□□ 0.67
Trbv4A0A075B5I2 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trbv4A0A075B5I2 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trbv4A0A075B5I2 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
Trbv4A0A075B5I2 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.24■□□□□ 0.67
Trbv4A0A075B5I2 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trbv4A0A075B5I2 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trbv4A0A075B5I2 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Trbv4A0A075B5I2 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trbv4A0A075B5I2 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trbv4A0A075B5I2 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trbv4A0A075B5I2 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trbv4A0A075B5I2 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Trbv4A0A075B5I2 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trbv4A0A075B5I2 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trbv4A0A075B5I2 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.23■□□□□ 0.67
Trbv4A0A075B5I2 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trbv4A0A075B5I2 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trbv4A0A075B5I2 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trbv4A0A075B5I2 Gm27801-201ENSMUST00000184174 223 ntBASIC19.23■□□□□ 0.67
Trbv4A0A075B5I2 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trbv4A0A075B5I2 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.23■□□□□ 0.67
Trbv4A0A075B5I2 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trbv4A0A075B5I2 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trbv4A0A075B5I2 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Trbv4A0A075B5I2 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trbv4A0A075B5I2 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Trbv4A0A075B5I2 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Trbv4A0A075B5I2 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Trbv4A0A075B5I2 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Trbv4A0A075B5I2 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trbv4A0A075B5I2 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Trbv4A0A075B5I2 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trbv4A0A075B5I2 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trbv4A0A075B5I2 Gm43017-201ENSMUST00000198296 752 ntBASIC19.22■□□□□ 0.67
Trbv4A0A075B5I2 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trbv4A0A075B5I2 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trbv4A0A075B5I2 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trbv4A0A075B5I2 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trbv4A0A075B5I2 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms