Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 C22orf15-203ENST00000402217 829 ntAPPRIS P3 TSL 2 BASIC11.81□□□□□ -0.52
SCN2BO60939 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC11.81□□□□□ -0.52
SCN2BO60939 VENTXP4-201ENST00000449029 958 ntBASIC11.81□□□□□ -0.52
SCN2BO60939 RN7SL684P-201ENST00000465665 294 ntBASIC11.81□□□□□ -0.52
SCN2BO60939 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SCN2BO60939 NUDT9P1-201ENST00000477230 745 ntBASIC11.81□□□□□ -0.52
SCN2BO60939 RN7SL363P-201ENST00000482412 273 ntBASIC11.81□□□□□ -0.52
SCN2BO60939 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SCN2BO60939 AC114321.1-201ENST00000520075 533 ntTSL 3 BASIC11.81□□□□□ -0.52
SCN2BO60939 VEGFA-224ENST00000523873 784 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SCN2BO60939 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SCN2BO60939 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC11.81□□□□□ -0.52
SCN2BO60939 DGAT2L7P-201ENST00000602462 744 ntBASIC11.81□□□□□ -0.52
SCN2BO60939 PIK3C3-210ENST00000589056 2074 ntTSL 2 BASIC11.81□□□□□ -0.52
SCN2BO60939 GFRA1-203ENST00000369236 9109 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
SCN2BO60939 ANXA11-202ENST00000372231 6720 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
SCN2BO60939 RPS6KB1-202ENST00000393021 5479 ntTSL 2 BASIC11.81□□□□□ -0.52
SCN2BO60939 ADGRF3-202ENST00000333478 3896 ntTSL 5 BASIC11.81□□□□□ -0.52
SCN2BO60939 FCHO1-208ENST00000595033 2907 ntTSL 2 BASIC11.81□□□□□ -0.52
SCN2BO60939 AC097372.1-201ENST00000636502 2127 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
SCN2BO60939 ALG8-201ENST00000299626 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SCN2BO60939 AL645608.3-201ENST00000448179 3043 ntTSL 2 BASIC11.81□□□□□ -0.52
SCN2BO60939 PTGFR-202ENST00000370757 4379 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SCN2BO60939 SMN1-202ENST00000380707 1536 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
SCN2BO60939 SMN2-203ENST00000380743 1536 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
SCN2BO60939 NARF-201ENST00000309794 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SCN2BO60939 ALOXE3-201ENST00000318227 3053 ntTSL 2 BASIC11.8□□□□□ -0.52
SCN2BO60939 SUCLG2-AS1-202ENST00000482677 2226 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SCN2BO60939 NMT1-213ENST00000592782 4999 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
SCN2BO60939 ZNF792-202ENST00000605484 2567 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SCN2BO60939 FAM90A21P-201ENST00000510875 1396 ntBASIC11.8□□□□□ -0.52
SCN2BO60939 FAM90A15P-201ENST00000514465 1395 ntBASIC11.8□□□□□ -0.52
SCN2BO60939 FAM90A16P-201ENST00000526662 1395 ntBASIC11.8□□□□□ -0.52
SCN2BO60939 FAM90A9P-201ENST00000527940 1395 ntBASIC11.8□□□□□ -0.52
SCN2BO60939 FAM90A5P-201ENST00000528738 1395 ntBASIC11.8□□□□□ -0.52
SCN2BO60939 FAM90A14P-201ENST00000530386 1395 ntBASIC11.8□□□□□ -0.52
SCN2BO60939 FAM90A13P-201ENST00000534703 1395 ntBASIC11.8□□□□□ -0.52
SCN2BO60939 GPHN-202ENST00000459628 1723 ntTSL 2 BASIC11.8□□□□□ -0.52
SCN2BO60939 ATP2B2-202ENST00000360273 8962 ntTSL 5 BASIC11.8□□□□□ -0.52
SCN2BO60939 SRC-203ENST00000373567 4321 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SCN2BO60939 FYN-203ENST00000368667 2416 ntAPPRIS P4 TSL 5 BASIC11.8□□□□□ -0.52
SCN2BO60939 CICP26-201ENST00000425003 2448 ntBASIC11.8□□□□□ -0.52
SCN2BO60939 SPATA18-201ENST00000295213 4396 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SCN2BO60939 CAGE1-201ENST00000296742 2821 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
SCN2BO60939 SORBS2-203ENST00000319471 2824 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SCN2BO60939 RIC8A-203ENST00000526104 3703 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SCN2BO60939 DNAJB8-202ENST00000469083 3365 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
SCN2BO60939 PANK2-206ENST00000497424 4815 ntTSL 2 BASIC11.8□□□□□ -0.52
SCN2BO60939 DEDD-203ENST00000458050 2300 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
SCN2BO60939 RNF24-202ENST00000358395 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SCN2BO60939 CYP20A1-210ENST00000613925 1986 ntTSL 2 BASIC11.8□□□□□ -0.52
SCN2BO60939 ZDHHC21-201ENST00000380916 9160 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SCN2BO60939 UNC13D-202ENST00000412096 3648 ntTSL 2 BASIC11.8□□□□□ -0.52
SCN2BO60939 MADD-209ENST00000406482 5614 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SCN2BO60939 NLRC5-203ENST00000436936 6724 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
SCN2BO60939 IGHV1-45-201ENST00000390621 411 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
SCN2BO60939 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC11.8□□□□□ -0.52
SCN2BO60939 RPL19P20-201ENST00000415648 591 ntBASIC11.8□□□□□ -0.52
SCN2BO60939 AQP7-207ENST00000447660 998 ntTSL 2 BASIC11.8□□□□□ -0.52
SCN2BO60939 AC067942.1-202ENST00000471756 1057 ntBASIC11.8□□□□□ -0.52
SCN2BO60939 HNRNPA3P6-201ENST00000472163 1006 ntBASIC11.8□□□□□ -0.52
SCN2BO60939 AL139807.1-201ENST00000500636 704 ntTSL 3 BASIC11.8□□□□□ -0.52
SCN2BO60939 H1FOO-202ENST00000503977 881 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SCN2BO60939 AC106047.2-201ENST00000511723 743 ntBASIC11.8□□□□□ -0.52
SCN2BO60939 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC11.8□□□□□ -0.52
SCN2BO60939 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SCN2BO60939 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC11.8□□□□□ -0.52
SCN2BO60939 AL158801.2-201ENST00000554650 554 ntTSL 3 BASIC11.8□□□□□ -0.52
SCN2BO60939 AC068831.5-201ENST00000557387 328 ntBASIC11.8□□□□□ -0.52
SCN2BO60939 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC11.8□□□□□ -0.52
SCN2BO60939 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SCN2BO60939 AC092301.1-201ENST00000601618 764 ntTSL 5 BASIC11.8□□□□□ -0.52
SCN2BO60939 GGNBP1-204ENST00000613113 887 ntBASIC11.8□□□□□ -0.52
SCN2BO60939 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC11.8□□□□□ -0.52
SCN2BO60939 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC11.8□□□□□ -0.52
SCN2BO60939 AC009084.3-201ENST00000623356 437 ntBASIC11.8□□□□□ -0.52
SCN2BO60939 PALLD-209ENST00000507735 4379 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SCN2BO60939 FKBP9P1-201ENST00000441699 1491 ntBASIC11.8□□□□□ -0.52
SCN2BO60939 GNG12-AS1-203ENST00000420587 2232 ntTSL 2 BASIC11.8□□□□□ -0.52
SCN2BO60939 MPP2-221ENST00000625880 4668 ntTSL 5 BASIC11.8□□□□□ -0.52
SCN2BO60939 AR-201ENST00000374690 10652 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SCN2BO60939 NLRP2-208ENST00000448584 3573 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
SCN2BO60939 LINC01070-201ENST00000561786 2829 ntTSL 2 BASIC11.8□□□□□ -0.52
SCN2BO60939 LINC02381-202ENST00000635070 1341 ntTSL 5 BASIC11.8□□□□□ -0.52
SCN2BO60939 SLC22A12-204ENST00000377574 3206 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SCN2BO60939 ILF3-219ENST00000590261 3219 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
SCN2BO60939 KCNA4-201ENST00000328224 4172 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SCN2BO60939 CABIN1-203ENST00000398319 7480 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
SCN2BO60939 AL359918.1-201ENST00000451892 2720 ntBASIC11.8□□□□□ -0.52
SCN2BO60939 NPSR1-209ENST00000531252 1377 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SCN2BO60939 AC240565.1-201ENST00000624936 1373 ntTSL 5 BASIC11.79□□□□□ -0.52
SCN2BO60939 ZNHIT6-201ENST00000370574 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SCN2BO60939 ARMC8-221ENST00000491704 2777 ntTSL 5 BASIC11.79□□□□□ -0.52
SCN2BO60939 LRTM2-202ENST00000535041 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SCN2BO60939 MRVI1-214ENST00000534266 2824 ntTSL 2 BASIC11.79□□□□□ -0.52
SCN2BO60939 IGSF3-203ENST00000369486 7254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SCN2BO60939 SLC25A14-213ENST00000543953 1403 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
SCN2BO60939 SLC6A4-203ENST00000401766 6543 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
SCN2BO60939 CABIN1-201ENST00000263119 7222 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
SCN2BO60939 ST6GAL1-215ENST00000457772 3947 ntTSL 5 BASIC11.79□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms