Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 AC092171.4-201ENST00000609130 632 ntBASIC17.58■□□□□ 0.4
FOXA2Q9Y261 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
FOXA2Q9Y261 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.58■□□□□ 0.4
FOXA2Q9Y261 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
FOXA2Q9Y261 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
FOXA2Q9Y261 AC007375.3-201ENST00000600936 2314 ntBASIC17.58■□□□□ 0.4
FOXA2Q9Y261 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FOXA2Q9Y261 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.57■□□□□ 0.4
FOXA2Q9Y261 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FOXA2Q9Y261 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.57■□□□□ 0.4
FOXA2Q9Y261 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
FOXA2Q9Y261 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
FOXA2Q9Y261 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FOXA2Q9Y261 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FOXA2Q9Y261 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
FOXA2Q9Y261 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FOXA2Q9Y261 FBXW4P1-201ENST00000426721 2239 ntBASIC17.57■□□□□ 0.4
FOXA2Q9Y261 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FOXA2Q9Y261 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FOXA2Q9Y261 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.57■□□□□ 0.4
FOXA2Q9Y261 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
FOXA2Q9Y261 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
FOXA2Q9Y261 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FOXA2Q9Y261 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
FOXA2Q9Y261 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FOXA2Q9Y261 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
FOXA2Q9Y261 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
FOXA2Q9Y261 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC17.56■□□□□ 0.4
FOXA2Q9Y261 AC004687.1-201ENST00000579003 1625 ntBASIC17.56■□□□□ 0.4
FOXA2Q9Y261 VGF-203ENST00000611537 1622 ntTSL 5 BASIC17.56■□□□□ 0.4
FOXA2Q9Y261 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
FOXA2Q9Y261 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
FOXA2Q9Y261 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
FOXA2Q9Y261 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FOXA2Q9Y261 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.56■□□□□ 0.4
FOXA2Q9Y261 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
FOXA2Q9Y261 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FOXA2Q9Y261 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.56■□□□□ 0.4
FOXA2Q9Y261 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC17.55■□□□□ 0.4
FOXA2Q9Y261 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC17.55■□□□□ 0.4
FOXA2Q9Y261 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.55■□□□□ 0.4
FOXA2Q9Y261 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
FOXA2Q9Y261 CA15P2-201ENST00000611168 834 ntBASIC17.55■□□□□ 0.4
FOXA2Q9Y261 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
FOXA2Q9Y261 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.55■□□□□ 0.4
FOXA2Q9Y261 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.54■□□□□ 0.4
FOXA2Q9Y261 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC17.54■□□□□ 0.4
FOXA2Q9Y261 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
FOXA2Q9Y261 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
FOXA2Q9Y261 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
FOXA2Q9Y261 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC17.54■□□□□ 0.4
FOXA2Q9Y261 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC17.54■□□□□ 0.4
FOXA2Q9Y261 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
FOXA2Q9Y261 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
FOXA2Q9Y261 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.54■□□□□ 0.4
FOXA2Q9Y261 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
FOXA2Q9Y261 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
FOXA2Q9Y261 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
FOXA2Q9Y261 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
FOXA2Q9Y261 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.53■□□□□ 0.4
FOXA2Q9Y261 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FOXA2Q9Y261 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FOXA2Q9Y261 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.53■□□□□ 0.4
FOXA2Q9Y261 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FOXA2Q9Y261 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
FOXA2Q9Y261 PEMT-206ENST00000435340 960 ntTSL 5 BASIC17.53■□□□□ 0.4
FOXA2Q9Y261 AC099791.2-201ENST00000605725 427 ntBASIC17.53■□□□□ 0.4
FOXA2Q9Y261 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC17.53■□□□□ 0.4
FOXA2Q9Y261 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.53■□□□□ 0.4
FOXA2Q9Y261 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.53■□□□□ 0.4
FOXA2Q9Y261 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.53■□□□□ 0.4
FOXA2Q9Y261 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FOXA2Q9Y261 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
FOXA2Q9Y261 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC17.53■□□□□ 0.4
FOXA2Q9Y261 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
FOXA2Q9Y261 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FOXA2Q9Y261 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.52■□□□□ 0.4
FOXA2Q9Y261 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
FOXA2Q9Y261 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC17.52■□□□□ 0.4
FOXA2Q9Y261 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FOXA2Q9Y261 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC17.52■□□□□ 0.4
FOXA2Q9Y261 DUX4L19-201ENST00000557448 1267 ntBASIC17.52■□□□□ 0.4
FOXA2Q9Y261 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
FOXA2Q9Y261 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.52■□□□□ 0.4
FOXA2Q9Y261 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC17.52■□□□□ 0.4
FOXA2Q9Y261 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
FOXA2Q9Y261 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC17.52■□□□□ 0.39
FOXA2Q9Y261 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.39
FOXA2Q9Y261 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
FOXA2Q9Y261 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
FOXA2Q9Y261 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
FOXA2Q9Y261 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
FOXA2Q9Y261 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FOXA2Q9Y261 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
FOXA2Q9Y261 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
FOXA2Q9Y261 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FOXA2Q9Y261 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
FOXA2Q9Y261 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
FOXA2Q9Y261 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.51■□□□□ 0.39
FOXA2Q9Y261 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms