Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SDHAF3Q9NRP4 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SDHAF3Q9NRP4 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SDHAF3Q9NRP4 OXCT2P1-201ENST00000447263 1535 ntBASIC19.92■□□□□ 0.78
SDHAF3Q9NRP4 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.91■□□□□ 0.78
SDHAF3Q9NRP4 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SDHAF3Q9NRP4 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SDHAF3Q9NRP4 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SDHAF3Q9NRP4 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SDHAF3Q9NRP4 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.91■□□□□ 0.78
SDHAF3Q9NRP4 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SDHAF3Q9NRP4 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.91■□□□□ 0.78
SDHAF3Q9NRP4 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.91■□□□□ 0.78
SDHAF3Q9NRP4 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.91■□□□□ 0.78
SDHAF3Q9NRP4 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SDHAF3Q9NRP4 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SDHAF3Q9NRP4 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
SDHAF3Q9NRP4 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SDHAF3Q9NRP4 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SDHAF3Q9NRP4 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SDHAF3Q9NRP4 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SDHAF3Q9NRP4 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SDHAF3Q9NRP4 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SDHAF3Q9NRP4 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SDHAF3Q9NRP4 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SDHAF3Q9NRP4 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.9■□□□□ 0.78
SDHAF3Q9NRP4 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SDHAF3Q9NRP4 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SDHAF3Q9NRP4 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SDHAF3Q9NRP4 AC068473.5-201ENST00000616428 2072 ntBASIC19.9■□□□□ 0.78
SDHAF3Q9NRP4 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.9■□□□□ 0.78
SDHAF3Q9NRP4 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SDHAF3Q9NRP4 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SDHAF3Q9NRP4 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SDHAF3Q9NRP4 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SDHAF3Q9NRP4 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SDHAF3Q9NRP4 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SDHAF3Q9NRP4 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SDHAF3Q9NRP4 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.89■□□□□ 0.77
SDHAF3Q9NRP4 AC105265.2-201ENST00000467189 838 ntBASIC19.89■□□□□ 0.77
SDHAF3Q9NRP4 AC079089.2-201ENST00000531211 1277 ntBASIC19.89■□□□□ 0.77
SDHAF3Q9NRP4 AC087742.1-201ENST00000575880 1738 ntBASIC19.89■□□□□ 0.77
SDHAF3Q9NRP4 C1orf229-201ENST00000623686 2258 ntBASIC19.89■□□□□ 0.77
SDHAF3Q9NRP4 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SDHAF3Q9NRP4 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SDHAF3Q9NRP4 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.88■□□□□ 0.77
SDHAF3Q9NRP4 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SDHAF3Q9NRP4 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
SDHAF3Q9NRP4 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SDHAF3Q9NRP4 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SDHAF3Q9NRP4 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SDHAF3Q9NRP4 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.88■□□□□ 0.77
SDHAF3Q9NRP4 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.88■□□□□ 0.77
SDHAF3Q9NRP4 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.88■□□□□ 0.77
SDHAF3Q9NRP4 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SDHAF3Q9NRP4 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
SDHAF3Q9NRP4 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
SDHAF3Q9NRP4 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SDHAF3Q9NRP4 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SDHAF3Q9NRP4 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SDHAF3Q9NRP4 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.88■□□□□ 0.77
SDHAF3Q9NRP4 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.88■□□□□ 0.77
SDHAF3Q9NRP4 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
SDHAF3Q9NRP4 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SDHAF3Q9NRP4 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SDHAF3Q9NRP4 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SDHAF3Q9NRP4 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SDHAF3Q9NRP4 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.87■□□□□ 0.77
SDHAF3Q9NRP4 IRS3P-201ENST00000223076 1006 ntBASIC19.87■□□□□ 0.77
SDHAF3Q9NRP4 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SDHAF3Q9NRP4 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.87■□□□□ 0.77
SDHAF3Q9NRP4 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.87■□□□□ 0.77
SDHAF3Q9NRP4 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.87■□□□□ 0.77
SDHAF3Q9NRP4 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
SDHAF3Q9NRP4 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SDHAF3Q9NRP4 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SDHAF3Q9NRP4 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SDHAF3Q9NRP4 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SDHAF3Q9NRP4 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SDHAF3Q9NRP4 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SDHAF3Q9NRP4 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.87■□□□□ 0.77
SDHAF3Q9NRP4 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
SDHAF3Q9NRP4 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SDHAF3Q9NRP4 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.86■□□□□ 0.77
SDHAF3Q9NRP4 MIR572-201ENST00000384983 95 ntBASIC19.86■□□□□ 0.77
SDHAF3Q9NRP4 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.86■□□□□ 0.77
SDHAF3Q9NRP4 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SDHAF3Q9NRP4 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SDHAF3Q9NRP4 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SDHAF3Q9NRP4 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SDHAF3Q9NRP4 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SDHAF3Q9NRP4 AC012676.1-201ENST00000574705 1949 ntBASIC19.86■□□□□ 0.77
SDHAF3Q9NRP4 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.86■□□□□ 0.77
SDHAF3Q9NRP4 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SDHAF3Q9NRP4 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SDHAF3Q9NRP4 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SDHAF3Q9NRP4 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SDHAF3Q9NRP4 AC127496.7-201ENST00000625110 1798 ntBASIC19.85■□□□□ 0.77
SDHAF3Q9NRP4 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SDHAF3Q9NRP4 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms