Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Upk1aQ9D132 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Upk1aQ9D132 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Upk1aQ9D132 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Upk1aQ9D132 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Upk1aQ9D132 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Upk1aQ9D132 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Upk1aQ9D132 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Upk1aQ9D132 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Upk1aQ9D132 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Upk1aQ9D132 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Upk1aQ9D132 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Upk1aQ9D132 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Upk1aQ9D132 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Upk1aQ9D132 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.33■□□□□ 0.52
Upk1aQ9D132 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Upk1aQ9D132 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.33■□□□□ 0.52
Upk1aQ9D132 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Upk1aQ9D132 Gm9870-201ENSMUST00000063874 645 ntBASIC18.33■□□□□ 0.52
Upk1aQ9D132 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Upk1aQ9D132 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Upk1aQ9D132 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Upk1aQ9D132 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.33■□□□□ 0.52
Upk1aQ9D132 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.33■□□□□ 0.52
Upk1aQ9D132 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Upk1aQ9D132 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.32■□□□□ 0.52
Upk1aQ9D132 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Upk1aQ9D132 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Upk1aQ9D132 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Upk1aQ9D132 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Upk1aQ9D132 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.32■□□□□ 0.52
Upk1aQ9D132 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.32■□□□□ 0.52
Upk1aQ9D132 Gm5812-201ENSMUST00000061073 957 ntBASIC18.32■□□□□ 0.52
Upk1aQ9D132 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Upk1aQ9D132 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Upk1aQ9D132 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Upk1aQ9D132 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Upk1aQ9D132 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Upk1aQ9D132 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Upk1aQ9D132 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Upk1aQ9D132 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Upk1aQ9D132 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Upk1aQ9D132 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Upk1aQ9D132 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Upk1aQ9D132 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Upk1aQ9D132 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Upk1aQ9D132 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Upk1aQ9D132 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Upk1aQ9D132 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Upk1aQ9D132 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Upk1aQ9D132 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.31■□□□□ 0.52
Upk1aQ9D132 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Upk1aQ9D132 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Upk1aQ9D132 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Upk1aQ9D132 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Upk1aQ9D132 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Upk1aQ9D132 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Upk1aQ9D132 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.31■□□□□ 0.52
Upk1aQ9D132 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Upk1aQ9D132 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Upk1aQ9D132 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Upk1aQ9D132 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Upk1aQ9D132 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Upk1aQ9D132 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Upk1aQ9D132 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.3■□□□□ 0.52
Upk1aQ9D132 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.3■□□□□ 0.52
Upk1aQ9D132 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Upk1aQ9D132 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.3■□□□□ 0.52
Upk1aQ9D132 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Upk1aQ9D132 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Upk1aQ9D132 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Upk1aQ9D132 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Upk1aQ9D132 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.29■□□□□ 0.52
Upk1aQ9D132 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Upk1aQ9D132 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Upk1aQ9D132 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Upk1aQ9D132 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Upk1aQ9D132 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.29■□□□□ 0.52
Upk1aQ9D132 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Upk1aQ9D132 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Upk1aQ9D132 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Upk1aQ9D132 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Upk1aQ9D132 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Upk1aQ9D132 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.28■□□□□ 0.52
Upk1aQ9D132 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Upk1aQ9D132 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Upk1aQ9D132 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Upk1aQ9D132 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Upk1aQ9D132 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Upk1aQ9D132 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Upk1aQ9D132 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Upk1aQ9D132 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.28■□□□□ 0.52
Upk1aQ9D132 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Upk1aQ9D132 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Upk1aQ9D132 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Upk1aQ9D132 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Upk1aQ9D132 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Upk1aQ9D132 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Upk1aQ9D132 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.27■□□□□ 0.52
Upk1aQ9D132 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms