Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CMSS1Q9BQ75 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CMSS1Q9BQ75 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CMSS1Q9BQ75 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CMSS1Q9BQ75 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.5■□□□□ 0.55
CMSS1Q9BQ75 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.5■□□□□ 0.55
CMSS1Q9BQ75 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
CMSS1Q9BQ75 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.5■□□□□ 0.55
CMSS1Q9BQ75 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
CMSS1Q9BQ75 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CMSS1Q9BQ75 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CMSS1Q9BQ75 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CMSS1Q9BQ75 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CMSS1Q9BQ75 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
CMSS1Q9BQ75 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CMSS1Q9BQ75 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CMSS1Q9BQ75 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CMSS1Q9BQ75 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CMSS1Q9BQ75 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CMSS1Q9BQ75 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CMSS1Q9BQ75 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CMSS1Q9BQ75 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC18.49■□□□□ 0.55
CMSS1Q9BQ75 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.49■□□□□ 0.55
CMSS1Q9BQ75 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CMSS1Q9BQ75 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CMSS1Q9BQ75 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CMSS1Q9BQ75 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CMSS1Q9BQ75 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CMSS1Q9BQ75 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CMSS1Q9BQ75 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CMSS1Q9BQ75 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CMSS1Q9BQ75 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CMSS1Q9BQ75 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CMSS1Q9BQ75 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
CMSS1Q9BQ75 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CMSS1Q9BQ75 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CMSS1Q9BQ75 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CMSS1Q9BQ75 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CMSS1Q9BQ75 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.48■□□□□ 0.55
CMSS1Q9BQ75 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CMSS1Q9BQ75 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CMSS1Q9BQ75 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CMSS1Q9BQ75 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CMSS1Q9BQ75 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.48■□□□□ 0.55
CMSS1Q9BQ75 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CMSS1Q9BQ75 DUX4L4-201ENST00000566884 1269 ntBASIC18.48■□□□□ 0.55
CMSS1Q9BQ75 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.48■□□□□ 0.55
CMSS1Q9BQ75 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CMSS1Q9BQ75 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CMSS1Q9BQ75 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.48■□□□□ 0.55
CMSS1Q9BQ75 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.48■□□□□ 0.55
CMSS1Q9BQ75 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CMSS1Q9BQ75 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.48■□□□□ 0.55
CMSS1Q9BQ75 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CMSS1Q9BQ75 AL391422.3-201ENST00000603791 2761 ntBASIC18.47■□□□□ 0.55
CMSS1Q9BQ75 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CMSS1Q9BQ75 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CMSS1Q9BQ75 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CMSS1Q9BQ75 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CMSS1Q9BQ75 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.47■□□□□ 0.55
CMSS1Q9BQ75 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.47■□□□□ 0.55
CMSS1Q9BQ75 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CMSS1Q9BQ75 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CMSS1Q9BQ75 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.47■□□□□ 0.55
CMSS1Q9BQ75 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CMSS1Q9BQ75 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CMSS1Q9BQ75 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CMSS1Q9BQ75 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CMSS1Q9BQ75 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CMSS1Q9BQ75 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CMSS1Q9BQ75 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
CMSS1Q9BQ75 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CMSS1Q9BQ75 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.46■□□□□ 0.55
CMSS1Q9BQ75 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.46■□□□□ 0.55
CMSS1Q9BQ75 AC021242.3-201ENST00000607598 1377 ntBASIC18.46■□□□□ 0.55
CMSS1Q9BQ75 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.46■□□□□ 0.55
CMSS1Q9BQ75 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CMSS1Q9BQ75 BX664725.1-201ENST00000438252 379 ntBASIC18.46■□□□□ 0.55
CMSS1Q9BQ75 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.46■□□□□ 0.55
CMSS1Q9BQ75 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CMSS1Q9BQ75 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CMSS1Q9BQ75 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CMSS1Q9BQ75 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
CMSS1Q9BQ75 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.45■□□□□ 0.54
CMSS1Q9BQ75 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CMSS1Q9BQ75 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.45■□□□□ 0.54
CMSS1Q9BQ75 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CMSS1Q9BQ75 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CMSS1Q9BQ75 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.45■□□□□ 0.54
CMSS1Q9BQ75 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.45■□□□□ 0.54
CMSS1Q9BQ75 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.45■□□□□ 0.54
CMSS1Q9BQ75 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.45■□□□□ 0.54
CMSS1Q9BQ75 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CMSS1Q9BQ75 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CMSS1Q9BQ75 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CMSS1Q9BQ75 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CMSS1Q9BQ75 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.44■□□□□ 0.54
CMSS1Q9BQ75 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.44■□□□□ 0.54
CMSS1Q9BQ75 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CMSS1Q9BQ75 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms