Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.19■□□□□ 0.98
PKP4Q99569 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.19■□□□□ 0.98
PKP4Q99569 AC099791.1-201ENST00000416440 715 ntBASIC21.19■□□□□ 0.98
PKP4Q99569 AC010141.3-201ENST00000456659 717 ntBASIC21.19■□□□□ 0.98
PKP4Q99569 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.19■□□□□ 0.98
PKP4Q99569 AF213884.3-201ENST00000563833 479 ntBASIC21.19■□□□□ 0.98
PKP4Q99569 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PKP4Q99569 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.19■□□□□ 0.98
PKP4Q99569 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.19■□□□□ 0.98
PKP4Q99569 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PKP4Q99569 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PKP4Q99569 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PKP4Q99569 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.18■□□□□ 0.98
PKP4Q99569 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
PKP4Q99569 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PKP4Q99569 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
PKP4Q99569 AC242852.2-201ENST00000615738 1807 ntBASIC21.18■□□□□ 0.98
PKP4Q99569 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PKP4Q99569 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
PKP4Q99569 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.18■□□□□ 0.98
PKP4Q99569 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.18■□□□□ 0.98
PKP4Q99569 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PKP4Q99569 AC126544.1-201ENST00000580842 1059 ntBASIC21.18■□□□□ 0.98
PKP4Q99569 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
PKP4Q99569 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.18■□□□□ 0.98
PKP4Q99569 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
PKP4Q99569 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PKP4Q99569 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.17■□□□□ 0.98
PKP4Q99569 AC139530.1-201ENST00000575312 1977 ntBASIC21.17■□□□□ 0.98
PKP4Q99569 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PKP4Q99569 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PKP4Q99569 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
PKP4Q99569 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PKP4Q99569 MIR939-201ENST00000401314 82 ntBASIC21.17■□□□□ 0.98
PKP4Q99569 AC027682.1-201ENST00000562846 899 ntBASIC21.17■□□□□ 0.98
PKP4Q99569 AC087239.1-201ENST00000622671 572 ntBASIC21.17■□□□□ 0.98
PKP4Q99569 AL136967.2-201ENST00000623968 743 ntBASIC21.17■□□□□ 0.98
PKP4Q99569 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PKP4Q99569 ECEL1P1-201ENST00000373592 1742 ntBASIC21.17■□□□□ 0.98
PKP4Q99569 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PKP4Q99569 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PKP4Q99569 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.17■□□□□ 0.98
PKP4Q99569 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
PKP4Q99569 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PKP4Q99569 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
PKP4Q99569 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
PKP4Q99569 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PKP4Q99569 SUDS3P1-201ENST00000505831 966 ntBASIC21.16■□□□□ 0.98
PKP4Q99569 AC079089.2-201ENST00000531211 1277 ntBASIC21.16■□□□□ 0.98
PKP4Q99569 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.16■□□□□ 0.98
PKP4Q99569 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PKP4Q99569 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.16■□□□□ 0.98
PKP4Q99569 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.15■□□□□ 0.98
PKP4Q99569 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PKP4Q99569 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PKP4Q99569 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.15■□□□□ 0.98
PKP4Q99569 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PKP4Q99569 AC005837.3-201ENST00000612163 286 ntBASIC21.15■□□□□ 0.98
PKP4Q99569 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PKP4Q99569 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.15■□□□□ 0.98
PKP4Q99569 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
PKP4Q99569 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PKP4Q99569 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.14■□□□□ 0.98
PKP4Q99569 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PKP4Q99569 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PKP4Q99569 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
PKP4Q99569 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.14■□□□□ 0.98
PKP4Q99569 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
PKP4Q99569 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PKP4Q99569 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.14■□□□□ 0.98
PKP4Q99569 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PKP4Q99569 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PKP4Q99569 MIR638-201ENST00000385237 100 ntBASIC21.14■□□□□ 0.97
PKP4Q99569 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PKP4Q99569 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.14■□□□□ 0.97
PKP4Q99569 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PKP4Q99569 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PKP4Q99569 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PKP4Q99569 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
PKP4Q99569 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PKP4Q99569 RASA4CP-201ENST00000424092 1398 ntBASIC21.13■□□□□ 0.97
PKP4Q99569 EP400NL-214ENST00000641289 2402 ntBASIC21.13■□□□□ 0.97
PKP4Q99569 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PKP4Q99569 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.13■□□□□ 0.97
PKP4Q99569 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.13■□□□□ 0.97
PKP4Q99569 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PKP4Q99569 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PKP4Q99569 OXCT2P1-201ENST00000447263 1535 ntBASIC21.13■□□□□ 0.97
PKP4Q99569 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.13■□□□□ 0.97
PKP4Q99569 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PKP4Q99569 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PKP4Q99569 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PKP4Q99569 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PKP4Q99569 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
PKP4Q99569 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PKP4Q99569 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.12■□□□□ 0.97
PKP4Q99569 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PKP4Q99569 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
PKP4Q99569 LINC00526-201ENST00000581067 1875 ntBASIC21.12■□□□□ 0.97
PKP4Q99569 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms